Cluster: HRGMv2_0730_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0730
- CGC Family ID: CGCFAM_02586
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0730_8 | HRGMv2_0730_8_4 | 2397 | 3377 | - | GT4 |
| pfam | HRGMv2_0730_8 | HRGMv2_0730_8_5 | 3374 | 4060 | - | Hydrolase | Hydrolase_like | HAD_2 |
| TC | HRGMv2_0730_8 | HRGMv2_0730_8_6 | 4057 | 5733 | - | 9.B.18.1.2 |
| STP | HRGMv2_0730_8 | HRGMv2_0730_8_7 | 5736 | 6863 | - | Aminotran_1_2 |
| TC | HRGMv2_0730_8 | HRGMv2_0730_8_8 | 6868 | 8703 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_0730_8_4
Type: CAZyme
Location: 2397 - 3377 (-)
Type: CAZyme
Location: 2397 - 3377 (-)
Gene ID: HRGMv2_0730_8_5
Type: pfam
Location: 3374 - 4060 (-)
Type: pfam
Location: 3374 - 4060 (-)
Gene ID: HRGMv2_0730_8_6
Type: TC
Location: 4057 - 5733 (-)
Type: TC
Location: 4057 - 5733 (-)
Gene ID: HRGMv2_0730_8_7
Type: STP
Location: 5736 - 6863 (-)
Type: STP
Location: 5736 - 6863 (-)
Gene ID: HRGMv2_0730_8_8
Type: TC
Location: 6868 - 8703 (-)
Type: TC
Location: 6868 - 8703 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium gallicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.