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Cluster: HRGMv2_0730_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0730_61 HRGMv2_0730_61_3 2123 2971 - 3.D.6.1.3
TC HRGMv2_0730_61 HRGMv2_0730_61_4 2968 3600 - 3.D.6.1.2
TC HRGMv2_0730_61 HRGMv2_0730_61_5 3602 4249 - 3.D.6.1.2
pfam HRGMv2_0730_61 HRGMv2_0730_61_6 4246 4878 - FMN_bind
TC HRGMv2_0730_61 HRGMv2_0730_61_7 4875 5936 - 3.D.6.1.2
TC HRGMv2_0730_61 HRGMv2_0730_61_8 5947 7239 - 3.D.6.1.1
TC HRGMv2_0730_61 HRGMv2_0730_61_9 7226 7765 - 2.A.87.3.1
CAZyme HRGMv2_0730_61 HRGMv2_0730_61_10 7971 11117 - GH3
Gene ID: HRGMv2_0730_61_3
Type: TC
Location: 2123 - 2971 (-)
Gene ID: HRGMv2_0730_61_4
Type: TC
Location: 2968 - 3600 (-)
Gene ID: HRGMv2_0730_61_5
Type: TC
Location: 3602 - 4249 (-)
Gene ID: HRGMv2_0730_61_6
Type: pfam
Location: 4246 - 4878 (-)
Gene ID: HRGMv2_0730_61_7
Type: TC
Location: 4875 - 5936 (-)
Gene ID: HRGMv2_0730_61_8
Type: TC
Location: 5947 - 7239 (-)
Gene ID: HRGMv2_0730_61_9
Type: TC
Location: 7226 - 7765 (-)
Gene ID: HRGMv2_0730_61_10
Type: CAZyme
Location: 7971 - 11117 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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