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Cluster: HRGMv2_0730_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0730_20 HRGMv2_0730_20_4 3491 6487 + GH3
NULL(UNKNOWN) HRGMv2_0730_20 HRGMv2_0730_20_5 6484 6894 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0730_20 HRGMv2_0730_20_6 7061 11356 + GH3
TC HRGMv2_0730_20 HRGMv2_0730_20_7 11484 13535 + 1.C.39.4.6
NULL(UNKNOWN) HRGMv2_0730_20 HRGMv2_0730_20_8 13548 13991 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0730_20 HRGMv2_0730_20_9 13988 16966 + GH3
CAZyme HRGMv2_0730_20 HRGMv2_0730_20_10 17066 19924 + GH3
NULL(UNKNOWN) HRGMv2_0730_20 HRGMv2_0730_20_11 19917 20021 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0730_20 HRGMv2_0730_20_12 20816 22324 + 2.A.50.2.1
TC HRGMv2_0730_20 HRGMv2_0730_20_13 22384 23946 + 4.C.1.1.4
Gene ID: HRGMv2_0730_20_4
Type: CAZyme
Location: 3491 - 6487 (+)
Gene ID: HRGMv2_0730_20_5
Type:
Location: 6484 - 6894 (+)
Gene ID: HRGMv2_0730_20_6
Type: CAZyme
Location: 7061 - 11356 (+)
Gene ID: HRGMv2_0730_20_7
Type: TC
Location: 11484 - 13535 (+)
Gene ID: HRGMv2_0730_20_8
Type:
Location: 13548 - 13991 (+)
Gene ID: HRGMv2_0730_20_9
Type: CAZyme
Location: 13988 - 16966 (+)
Gene ID: HRGMv2_0730_20_10
Type: CAZyme
Location: 17066 - 19924 (+)
Gene ID: HRGMv2_0730_20_11
Type:
Location: 19917 - 20021 (+)
Gene ID: HRGMv2_0730_20_12
Type: TC
Location: 20816 - 22324 (+)
Gene ID: HRGMv2_0730_20_13
Type: TC
Location: 22384 - 23946 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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