Genome Details
Selected Rep_genome_ID: HRGMv2_0552
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp934204655
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0552 | 2,566,148 | 98.49% | 0% | Tanzania | Africa | HRGM |
| KY176_81 | 2,603,191 | 95.92% | 0.58% | NA | Africa | H3AfricaPhase2 |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Nepal_MoBio_Fiber-Hadza-Nepal_B_9_CHE0002SZ.93 | 2,485,989 | 95.8% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0552_CGC15 | CGCFAM_00028 | Yes | 4 | 3 | |
| HRGMv2_0552_CGC1 | CGCFAM_00081 | Yes | 12 | 1 | |
| HRGMv2_0552_CGC16 | CGCFAM_00181 | Yes | 11 | 1 | |
| HRGMv2_0552_CGC14 | CGCFAM_00183 | Yes | 12 | 5 | pectin/host glycan |
| HRGMv2_0552_CGC19 | CGCFAM_00437 | Yes | 10 | 1 | |
| HRGMv2_0552_CGC20 | CGCFAM_00513 | Yes | 9 | 3 | |
| HRGMv2_0552_CGC34 | CGCFAM_00519 | Yes | 7 | 2 | |
| HRGMv2_0552_CGC11 | CGCFAM_01216 | Yes | 4 | 2 | |
| HRGMv2_0552_CGC29 | CGCFAM_01270 | Yes | 6 | 1 | |
| HRGMv2_0552_CGC33 | CGCFAM_01612 | Yes | 4 | 1 | |
| HRGMv2_0552_CGC7 | CGCFAM_03989 | Yes | 4 | 1 | |
| HRGMv2_0552_CGC27 | CGCFAM_05809 | Yes | 6 | 1 | |
| HRGMv2_0552_CGC8 | CGCFAM_05810 | Yes | 9 | 5 | |
| HRGMv2_0552_CGC24 | CGCFAM_09114 | Yes | 5 | 1 | |
| HRGMv2_0552_CGC26 | CGCFAM_09717 | Yes | 7 | 2 |
Top CAZyme Families