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Cluster: HRGMv2_0552_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0552_5 HRGMv2_0552_5_40 39533 40546 - 3.A.2.1.7
NULL(UNKNOWN) HRGMv2_0552_5 HRGMv2_0552_5_41 40601 41029 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0552_5 HRGMv2_0552_5_42 41038 41280 - ATP-synt_DE_N
TC HRGMv2_0552_5 HRGMv2_0552_5_43 41306 42832 - 3.A.2.1.2
pfam HRGMv2_0552_5 HRGMv2_0552_5_44 42874 43851 - PFK
TC HRGMv2_0552_5 HRGMv2_0552_5_45 43881 45224 - 2.A.62.1.3
NULL(UNKNOWN) HRGMv2_0552_5 HRGMv2_0552_5_46 45235 45360 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0552_5 HRGMv2_0552_5_47 45585 46580 - GT2
pfam HRGMv2_0552_5 HRGMv2_0552_5_48 46577 48079 - Polysacc_synt_3
TC HRGMv2_0552_5 HRGMv2_0552_5_49 49332 50036 - 3.A.1.128.6
TC HRGMv2_0552_5 HRGMv2_0552_5_50 50039 53380 - 3.A.5.1.1
Gene ID: HRGMv2_0552_5_40
Type: TC
Location: 39533 - 40546 (-)
Gene ID: HRGMv2_0552_5_41
Type:
Location: 40601 - 41029 (-)
Gene ID: HRGMv2_0552_5_42
Type: pfam
Location: 41038 - 41280 (-)
Gene ID: HRGMv2_0552_5_43
Type: TC
Location: 41306 - 42832 (-)
Gene ID: HRGMv2_0552_5_44
Type: pfam
Location: 42874 - 43851 (-)
Gene ID: HRGMv2_0552_5_45
Type: TC
Location: 43881 - 45224 (-)
Gene ID: HRGMv2_0552_5_46
Type:
Location: 45235 - 45360 (-)
Gene ID: HRGMv2_0552_5_47
Type: CAZyme
Location: 45585 - 46580 (-)
Gene ID: HRGMv2_0552_5_48
Type: pfam
Location: 46577 - 48079 (-)
Gene ID: HRGMv2_0552_5_49
Type: TC
Location: 49332 - 50036 (-)
Gene ID: HRGMv2_0552_5_50
Type: TC
Location: 50039 - 53380 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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