Cluster: HRGMv2_0552_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0552
- CGC Family ID: CGCFAM_09717
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0552_17 | HRGMv2_0552_17_8 | 9364 | 10839 | + | GT2 |
| pfam | HRGMv2_0552_17 | HRGMv2_0552_17_9 | 10873 | 13866 | + | TPR_6 | TPR_16 | YaiO |
| CAZyme | HRGMv2_0552_17 | HRGMv2_0552_17_10 | 13835 | 15988 | + | GH163 |
| pfam | HRGMv2_0552_17 | HRGMv2_0552_17_11 | 15997 | 16587 | + | DUF1573 | HYDIN_VesB_CFA65-like_Ig |
| NULL(UNKNOWN) | HRGMv2_0552_17 | HRGMv2_0552_17_12 | 16680 | 17804 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0552_17 | HRGMv2_0552_17_13 | 18916 | 22011 | + | 1.B.14.6.13 |
| TC | HRGMv2_0552_17 | HRGMv2_0552_17_14 | 22033 | 23637 | + | 8.A.46.2.2 |
Gene ID: HRGMv2_0552_17_8
Type: CAZyme
Location: 9364 - 10839 (+)
Type: CAZyme
Location: 9364 - 10839 (+)
Gene ID: HRGMv2_0552_17_9
Type: pfam
Location: 10873 - 13866 (+)
Type: pfam
Location: 10873 - 13866 (+)
Gene ID: HRGMv2_0552_17_10
Type: CAZyme
Location: 13835 - 15988 (+)
Type: CAZyme
Location: 13835 - 15988 (+)
Gene ID: HRGMv2_0552_17_11
Type: pfam
Location: 15997 - 16587 (+)
Type: pfam
Location: 15997 - 16587 (+)
Gene ID: HRGMv2_0552_17_12
Type:
Location: 16680 - 17804 (+)
Type:
Location: 16680 - 17804 (+)
Gene ID: HRGMv2_0552_17_13
Type: TC
Location: 18916 - 22011 (+)
Type: TC
Location: 18916 - 22011 (+)
Gene ID: HRGMv2_0552_17_14
Type: TC
Location: 22033 - 23637 (+)
Type: TC
Location: 22033 - 23637 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp934204655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.