Cluster: HRGMv2_0552_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0552
- CGC Family ID: CGCFAM_09114
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0552_15 | HRGMv2_0552_15_24 | 39121 | 41100 | - | 2.A.67.4.2 |
| peptidase | HRGMv2_0552_15 | HRGMv2_0552_15_25 | 41637 | 43781 | + | M06.UPW |
| TC | HRGMv2_0552_15 | HRGMv2_0552_15_26 | 43889 | 46447 | - | 3.A.9.1.2 |
| NULL(UNKNOWN) | HRGMv2_0552_15 | HRGMv2_0552_15_27 | 46581 | 46826 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0552_15 | HRGMv2_0552_15_28 | 47007 | 48884 | + | GH35 |
Gene ID: HRGMv2_0552_15_24
Type: TC
Location: 39121 - 41100 (-)
Type: TC
Location: 39121 - 41100 (-)
Gene ID: HRGMv2_0552_15_25
Type: peptidase
Location: 41637 - 43781 (+)
Type: peptidase
Location: 41637 - 43781 (+)
Gene ID: HRGMv2_0552_15_26
Type: TC
Location: 43889 - 46447 (-)
Type: TC
Location: 43889 - 46447 (-)
Gene ID: HRGMv2_0552_15_27
Type:
Location: 46581 - 46826 (-)
Type:
Location: 46581 - 46826 (-)
Gene ID: HRGMv2_0552_15_28
Type: CAZyme
Location: 47007 - 48884 (+)
Type: CAZyme
Location: 47007 - 48884 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp934204655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.