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Cluster: HRGMv2_0552_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0552_1 HRGMv2_0552_1_14 11921 12883 - GT2
pfam HRGMv2_0552_1 HRGMv2_0552_1_15 12900 13439 - DUF4199
TC HRGMv2_0552_1 HRGMv2_0552_1_16 13831 15318 - 3.D.1.2.1
TC HRGMv2_0552_1 HRGMv2_0552_1_17 15349 16854 - 3.D.1.5.1
TC HRGMv2_0552_1 HRGMv2_0552_1_18 16868 18820 - 3.D.1.8.1
TC HRGMv2_0552_1 HRGMv2_0552_1_19 18829 19140 - 3.D.1.2.1
TC HRGMv2_0552_1 HRGMv2_0552_1_20 19137 19658 - 3.D.9.1.1
STP HRGMv2_0552_1 HRGMv2_0552_1_21 19666 20196 - Fer4 | Fer4
TC HRGMv2_0552_1 HRGMv2_0552_1_22 20264 21349 - 3.D.1.5.1
TC HRGMv2_0552_1 HRGMv2_0552_1_23 21388 22959 - 3.D.1.5.1
TC HRGMv2_0552_1 HRGMv2_0552_1_24 22980 23705 - 3.D.1.6.1
TC HRGMv2_0552_1 HRGMv2_0552_1_25 23696 24046 - 3.D.1.8.1
Gene ID: HRGMv2_0552_1_14
Type: CAZyme
Location: 11921 - 12883 (-)
Gene ID: HRGMv2_0552_1_15
Type: pfam
Location: 12900 - 13439 (-)
Gene ID: HRGMv2_0552_1_16
Type: TC
Location: 13831 - 15318 (-)
Gene ID: HRGMv2_0552_1_17
Type: TC
Location: 15349 - 16854 (-)
Gene ID: HRGMv2_0552_1_18
Type: TC
Location: 16868 - 18820 (-)
Gene ID: HRGMv2_0552_1_19
Type: TC
Location: 18829 - 19140 (-)
Gene ID: HRGMv2_0552_1_20
Type: TC
Location: 19137 - 19658 (-)
Gene ID: HRGMv2_0552_1_21
Type: STP
Location: 19666 - 20196 (-)
Gene ID: HRGMv2_0552_1_22
Type: TC
Location: 20264 - 21349 (-)
Gene ID: HRGMv2_0552_1_23
Type: TC
Location: 21388 - 22959 (-)
Gene ID: HRGMv2_0552_1_24
Type: TC
Location: 22980 - 23705 (-)
Gene ID: HRGMv2_0552_1_25
Type: TC
Location: 23696 - 24046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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