dbCAN Logo

Genome Details

Selected Rep_genome_ID: HRGMv2_0426
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genus
CAG-873
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0426 3,251,547 96.66% 0.503% UK Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0426_CGC18 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0426_CGC4 CGCFAM_00023 Yes 5 3
HRGMv2_0426_CGC20 CGCFAM_00028 Yes 4 3
HRGMv2_0426_CGC28 CGCFAM_00031 Yes 8 4 pectin/galactan
HRGMv2_0426_CGC39 CGCFAM_00108 Yes 10 4 pectin
HRGMv2_0426_CGC45 CGCFAM_00118 Yes 5 2
HRGMv2_0426_CGC22 CGCFAM_00273 Yes 22 14 xylan
HRGMv2_0426_CGC36 CGCFAM_00485 Yes 10 2 galactan/pectin/host glycan
HRGMv2_0426_CGC34 CGCFAM_00582 Yes 8 2 arabinogalactan
HRGMv2_0426_CGC12 CGCFAM_00657 Yes 3 1
HRGMv2_0426_CGC8 CGCFAM_00860 Yes 3 1
HRGMv2_0426_CGC13 CGCFAM_01227 Yes 5 2
HRGMv2_0426_CGC16 CGCFAM_01228 Yes 4 2
HRGMv2_0426_CGC9 CGCFAM_01503 Yes 17 10
HRGMv2_0426_CGC5 CGCFAM_02238 Yes 4 2
HRGMv2_0426_CGC24 CGCFAM_02851 Yes 3 1
HRGMv2_0426_CGC38 CGCFAM_03330 Yes 4 1
HRGMv2_0426_CGC43 CGCFAM_03699 Yes 3 1
HRGMv2_0426_CGC15 CGCFAM_04761 Yes 4 1
HRGMv2_0426_CGC32 CGCFAM_04850 Yes 6 2
HRGMv2_0426_CGC44 CGCFAM_09632 Yes 4 1
HRGMv2_0426_CGC11 CGCFAM_09670 Yes 5 1
HRGMv2_0426_CGC19 CGCFAM_09671 Yes 5 1
HRGMv2_0426_CGC2 CGCFAM_09672 Yes 5 1
HRGMv2_0426_CGC25 CGCFAM_09673 Yes 7 2
Top CAZyme Families