Cluster: HRGMv2_0426_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0426
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0426_6 | HRGMv2_0426_6_20 | 17752 | 20346 | - | GH3 |
| pfam | HRGMv2_0426_6 | HRGMv2_0426_6_21 | 20343 | 21581 | - | Metallophos | Pur_ac_phosph_N |
| pfam | HRGMv2_0426_6 | HRGMv2_0426_6_22 | 21664 | 23463 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0426_6 | HRGMv2_0426_6_23 | 23504 | 27106 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0426_6_20
Type: CAZyme
Location: 17752 - 20346 (-)
Type: CAZyme
Location: 17752 - 20346 (-)
Gene ID: HRGMv2_0426_6_21
Type: pfam
Location: 20343 - 21581 (-)
Type: pfam
Location: 20343 - 21581 (-)
Gene ID: HRGMv2_0426_6_22
Type: pfam
Location: 21664 - 23463 (-)
Type: pfam
Location: 21664 - 23463 (-)
Gene ID: HRGMv2_0426_6_23
Type: TC
Location: 23504 - 27106 (-)
Type: TC
Location: 23504 - 27106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp900548975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.