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Cluster: HRGMv2_0426_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0426_16 HRGMv2_0426_16_13 21936 25190 - 1.B.14.6.1
TF HRGMv2_0426_16 HRGMv2_0426_16_14 25343 29260 - HTH_AraC
CAZyme HRGMv2_0426_16 HRGMv2_0426_16_15 29381 31153 - GH93
pfam HRGMv2_0426_16 HRGMv2_0426_16_16 31155 32711 - Mfa_like_1
pfam HRGMv2_0426_16 HRGMv2_0426_16_17 32974 34815 + Abhydrolase_2
CAZyme HRGMv2_0426_16 HRGMv2_0426_16_18 34892 35995 - GH43_33
TC HRGMv2_0426_16 HRGMv2_0426_16_19 36167 37537 + 2.A.22.5.3
Gene ID: HRGMv2_0426_16_13
Type: TC
Location: 21936 - 25190 (-)
Gene ID: HRGMv2_0426_16_14
Type: TF
Location: 25343 - 29260 (-)
Gene ID: HRGMv2_0426_16_15
Type: CAZyme
Location: 29381 - 31153 (-)
Gene ID: HRGMv2_0426_16_16
Type: pfam
Location: 31155 - 32711 (-)
Gene ID: HRGMv2_0426_16_17
Type: pfam
Location: 32974 - 34815 (+)
Gene ID: HRGMv2_0426_16_18
Type: CAZyme
Location: 34892 - 35995 (-)
Gene ID: HRGMv2_0426_16_19
Type: TC
Location: 36167 - 37537 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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