Genome Details
Selected Rep_genome_ID: HRGMv2_0273
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002299635
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF022_36 | 2,715,910 | 97.97% | 0.89% | NA | Africa | H3AfricaPhase2 |
| CGMR022642 | 2,506,746 | 94.51% | 0.89% | China | Asia | CGMR |
| DianaHT_2018_SRR6795025_bin.21 | 2,528,873 | 96.62% | 0.96% | Bangladesh | Asia | ELGG |
| GCA_021629565.1_ASM2162956v1_genomic | 2,503,732 | 97.76% | 1.06% | NA | Africa | H3AfricaPhase1 |
| GCA_021633475.1_ASM2163347v1_genomic | 2,806,738 | 96.27% | 0.56% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0273 | 2,612,782 | 96.61% | 0.555% | India | Asia | HRGM |
| MGYG000000631 | 2,636,006 | 97.94% | 0.89% | Madagascar | Africa | UHGG |
| Rep_260 | 3,261,300 | 97.8604% | 1.90637% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0273_CGC30 | CGCFAM_00001 | Yes | 6 | 1 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0273_CGC7 | CGCFAM_00005 | Yes | 5 | 4 | |
| HRGMv2_0273_CGC18 | CGCFAM_00017 | Yes | 8 | 3 | fructan |
| HRGMv2_0273_CGC6 | CGCFAM_00079 | Yes | 4 | 1 | pectin |
| HRGMv2_0273_CGC36 | CGCFAM_00081 | Yes | 8 | 1 | |
| HRGMv2_0273_CGC28 | CGCFAM_00197 | Yes | 7 | 1 | |
| HRGMv2_0273_CGC10 | CGCFAM_00337 | Yes | 12 | 2 | |
| HRGMv2_0273_CGC20 | CGCFAM_00451 | Yes | 5 | 1 | |
| HRGMv2_0273_CGC24 | CGCFAM_00519 | Yes | 15 | 3 | |
| HRGMv2_0273_CGC21 | CGCFAM_00521 | Yes | 6 | 1 | |
| HRGMv2_0273_CGC35 | CGCFAM_00551 | Yes | 4 | 2 | |
| HRGMv2_0273_CGC12 | CGCFAM_00644 | Yes | 4 | 2 | |
| HRGMv2_0273_CGC1 | CGCFAM_01270 | Yes | 6 | 1 | |
| HRGMv2_0273_CGC26 | CGCFAM_01603 | Yes | 7 | 1 |
Top CAZyme Families