Cluster: HRGMv2_0273_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0273
- CGC Family ID: CGCFAM_01603
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0273_20 | HRGMv2_0273_20_23 | 26335 | 27282 | - | 3.A.5.1.1 |
| NULL(UNKNOWN) | HRGMv2_0273_20 | HRGMv2_0273_20_24 | 27300 | 27491 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0273_20 | HRGMv2_0273_20_25 | 27504 | 29012 | - | DUF4270 |
| CAZyme | HRGMv2_0273_20 | HRGMv2_0273_20_26 | 29016 | 29825 | - | GT5 |
| pfam | HRGMv2_0273_20 | HRGMv2_0273_20_27 | 29952 | 30428 | - | Biotin_lipoyl | Biotin_lipoyl_2 |
| NULL(UNKNOWN) | HRGMv2_0273_20 | HRGMv2_0273_20_28 | 30389 | 30538 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0273_20 | HRGMv2_0273_20_29 | 30561 | 32126 | - | 3.B.1.1.2 |
Gene ID: HRGMv2_0273_20_23
Type: TC
Location: 26335 - 27282 (-)
Type: TC
Location: 26335 - 27282 (-)
Gene ID: HRGMv2_0273_20_24
Type:
Location: 27300 - 27491 (-)
Type:
Location: 27300 - 27491 (-)
Gene ID: HRGMv2_0273_20_25
Type: pfam
Location: 27504 - 29012 (-)
Type: pfam
Location: 27504 - 29012 (-)
Gene ID: HRGMv2_0273_20_26
Type: CAZyme
Location: 29016 - 29825 (-)
Type: CAZyme
Location: 29016 - 29825 (-)
Gene ID: HRGMv2_0273_20_27
Type: pfam
Location: 29952 - 30428 (-)
Type: pfam
Location: 29952 - 30428 (-)
Gene ID: HRGMv2_0273_20_28
Type:
Location: 30389 - 30538 (-)
Type:
Location: 30389 - 30538 (-)
Gene ID: HRGMv2_0273_20_29
Type: TC
Location: 30561 - 32126 (-)
Type: TC
Location: 30561 - 32126 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002299635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.