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Cluster: HRGMv2_0273_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0273_44 HRGMv2_0273_44_1 1 300 - 3.D.1.8.1
pfam HRGMv2_0273_44 HRGMv2_0273_44_2 297 818 - Oxidored_q3
STP HRGMv2_0273_44 HRGMv2_0273_44_3 824 1387 - Fer4
TC HRGMv2_0273_44 HRGMv2_0273_44_4 1436 2521 - 3.D.1.5.1
TC HRGMv2_0273_44 HRGMv2_0273_44_5 2584 4158 - 3.D.1.5.1
TC HRGMv2_0273_44 HRGMv2_0273_44_6 4168 4935 - 3.D.1.6.1
TC HRGMv2_0273_44 HRGMv2_0273_44_7 4926 5276 - 3.D.1.8.1
CAZyme HRGMv2_0273_44 HRGMv2_0273_44_8 5997 8471 - GH2
Gene ID: HRGMv2_0273_44_1
Type: TC
Location: 1 - 300 (-)
Gene ID: HRGMv2_0273_44_2
Type: pfam
Location: 297 - 818 (-)
Gene ID: HRGMv2_0273_44_3
Type: STP
Location: 824 - 1387 (-)
Gene ID: HRGMv2_0273_44_4
Type: TC
Location: 1436 - 2521 (-)
Gene ID: HRGMv2_0273_44_5
Type: TC
Location: 2584 - 4158 (-)
Gene ID: HRGMv2_0273_44_6
Type: TC
Location: 4168 - 4935 (-)
Gene ID: HRGMv2_0273_44_7
Type: TC
Location: 4926 - 5276 (-)
Gene ID: HRGMv2_0273_44_8
Type: CAZyme
Location: 5997 - 8471 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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