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Cluster: HRGMv2_0273_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0273_5 HRGMv2_0273_5_48 58884 60242 + 2.A.22.5.3
TC HRGMv2_0273_5 HRGMv2_0273_5_49 60254 61597 + 2.A.22.5.3
pfam HRGMv2_0273_5 HRGMv2_0273_5_50 61602 62531 + HHH_3 | HHH_3 | HHH_3
pfam HRGMv2_0273_5 HRGMv2_0273_5_51 62550 63020 + DUF4252
CAZyme HRGMv2_0273_5 HRGMv2_0273_5_52 64223 65509 - GH53
pfam HRGMv2_0273_5 HRGMv2_0273_5_53 65561 66106 - Y1_Tnp
CAZyme HRGMv2_0273_5 HRGMv2_0273_5_54 66400 68250 - GH13_6
TC HRGMv2_0273_5 HRGMv2_0273_5_55 68575 71661 + 1.B.14.6.1
TC HRGMv2_0273_5 HRGMv2_0273_5_56 71682 73307 + 8.A.46.1.1
pfam HRGMv2_0273_5 HRGMv2_0273_5_57 73337 74515 + SusE | SusF_SusE
pfam HRGMv2_0273_5 HRGMv2_0273_5_58 74597 75973 + SusF_N
TC HRGMv2_0273_5 HRGMv2_0273_5_59 76487 79882 + 1.B.14.6.1
Gene ID: HRGMv2_0273_5_48
Type: TC
Location: 58884 - 60242 (+)
Gene ID: HRGMv2_0273_5_49
Type: TC
Location: 60254 - 61597 (+)
Gene ID: HRGMv2_0273_5_50
Type: pfam
Location: 61602 - 62531 (+)
Gene ID: HRGMv2_0273_5_51
Type: pfam
Location: 62550 - 63020 (+)
Gene ID: HRGMv2_0273_5_52
Type: CAZyme
Location: 64223 - 65509 (-)
Gene ID: HRGMv2_0273_5_53
Type: pfam
Location: 65561 - 66106 (-)
Gene ID: HRGMv2_0273_5_54
Type: CAZyme
Location: 66400 - 68250 (-)
Gene ID: HRGMv2_0273_5_55
Type: TC
Location: 68575 - 71661 (+)
Gene ID: HRGMv2_0273_5_56
Type: TC
Location: 71682 - 73307 (+)
Gene ID: HRGMv2_0273_5_57
Type: pfam
Location: 73337 - 74515 (+)
Gene ID: HRGMv2_0273_5_58
Type: pfam
Location: 74597 - 75973 (+)
Gene ID: HRGMv2_0273_5_59
Type: TC
Location: 76487 - 79882 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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