Cluster: HRGMv2_0273_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0273
- CGC Family ID: CGCFAM_00521
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0273_12 | HRGMv2_0273_12_25 | 25434 | 26573 | - | CE1 |
| pfam | HRGMv2_0273_12 | HRGMv2_0273_12_26 | 26826 | 28223 | - | MFS_1 |
| peptidase | HRGMv2_0273_12 | HRGMv2_0273_12_27 | 28320 | 30506 | - | S09.UPC |
| TC | HRGMv2_0273_12 | HRGMv2_0273_12_28 | 30588 | 32531 | - | 2.A.9.3.1 |
| peptidase | HRGMv2_0273_12 | HRGMv2_0273_12_29 | 32532 | 34208 | - | C26.964 |
| TC | HRGMv2_0273_12 | HRGMv2_0273_12_30 | 34288 | 35595 | + | 9.B.168.1.2 |
Gene ID: HRGMv2_0273_12_25
Type: CAZyme
Location: 25434 - 26573 (-)
Type: CAZyme
Location: 25434 - 26573 (-)
Gene ID: HRGMv2_0273_12_26
Type: pfam
Location: 26826 - 28223 (-)
Type: pfam
Location: 26826 - 28223 (-)
Gene ID: HRGMv2_0273_12_27
Type: peptidase
Location: 28320 - 30506 (-)
Type: peptidase
Location: 28320 - 30506 (-)
Gene ID: HRGMv2_0273_12_28
Type: TC
Location: 30588 - 32531 (-)
Type: TC
Location: 30588 - 32531 (-)
Gene ID: HRGMv2_0273_12_29
Type: peptidase
Location: 32532 - 34208 (-)
Type: peptidase
Location: 32532 - 34208 (-)
Gene ID: HRGMv2_0273_12_30
Type: TC
Location: 34288 - 35595 (+)
Type: TC
Location: 34288 - 35595 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp002299635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.