Genome Details
Selected Rep_genome_ID: HRGMv2_0190
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900544195
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR067417 | 3,094,769 | 95.56% | 0.63% | China | Asia | CGMR |
| GCA_021621345.1_ASM2162134v1_genomic | 2,993,472 | 93.17% | 0.95% | NA | Africa | H3AfricaPhase1 |
| GCA_021630165.1_ASM2163016v1_genomic | 2,938,601 | 90.84% | 0.63% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0190 | 3,180,657 | 94.6% | 0.158% | Ghana | Africa | HRGM |
| KY008_bin.20 | 3,243,558 | 96.03% | 0.63% | NA | Africa | H3AfricaPhase2 |
| MGYG000000584 | 3,056,711 | 95.56% | 0.48% | Madagascar | Africa | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_D_1_1586.17 | 3,364,612 | 93.65% | 0% | NA | Africa | Hadza |
| Rep_50 | 2,998,933 | 95.5556% | 0.634921% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0190_CGC27 | CGCFAM_00001 | Yes | 4 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0190_CGC9 | CGCFAM_00022 | Yes | 3 | 2 | |
| HRGMv2_0190_CGC38 | CGCFAM_00030 | Yes | 4 | 2 | |
| HRGMv2_0190_CGC44 | CGCFAM_00033 | Yes | 5 | 2 | |
| HRGMv2_0190_CGC23 | CGCFAM_00071 | Yes | 9 | 3 | |
| HRGMv2_0190_CGC19 | CGCFAM_00118 | Yes | 5 | 2 | |
| HRGMv2_0190_CGC16 | CGCFAM_00120 | Yes | 5 | 2 | |
| HRGMv2_0190_CGC37 | CGCFAM_00128 | Yes | 8 | 2 | |
| HRGMv2_0190_CGC3 | CGCFAM_00156 | Yes | 3 | 1 | |
| HRGMv2_0190_CGC33 | CGCFAM_00158 | Yes | 8 | 3 | |
| HRGMv2_0190_CGC26 | CGCFAM_00444 | Yes | 4 | 1 | |
| HRGMv2_0190_CGC30 | CGCFAM_00639 | Yes | 5 | 1 | |
| HRGMv2_0190_CGC25 | CGCFAM_00647 | Yes | 8 | 3 | |
| HRGMv2_0190_CGC41 | CGCFAM_00860 | Yes | 5 | 1 | |
| HRGMv2_0190_CGC12 | CGCFAM_01094 | Yes | 6 | 5 | |
| HRGMv2_0190_CGC6 | CGCFAM_02623 | Yes | 6 | 2 | |
| HRGMv2_0190_CGC31 | CGCFAM_03606 | Yes | 4 | 1 | |
| HRGMv2_0190_CGC5 | CGCFAM_04196 | Yes | 10 | 3 | |
| HRGMv2_0190_CGC43 | CGCFAM_05169 | Yes | 6 | 1 | |
| HRGMv2_0190_CGC10 | CGCFAM_09534 | Yes | 16 | 2 |
Top CAZyme Families