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Cluster: HRGMv2_0190_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0190_45 HRGMv2_0190_45_2 797 2167 - 8.A.59.2.1
TC HRGMv2_0190_45 HRGMv2_0190_45_3 2366 3700 + 2.A.2.6.2
TC HRGMv2_0190_45 HRGMv2_0190_45_4 3721 6756 + 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0190_45 HRGMv2_0190_45_5 6770 7171 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0190_45 HRGMv2_0190_45_6 7298 8374 + 8.A.46.1.1
pfam HRGMv2_0190_45 HRGMv2_0190_45_7 8381 10729 + SusE | SusF_SusE
CAZyme HRGMv2_0190_45 HRGMv2_0190_45_8 10807 12810 + GH13_36
CAZyme HRGMv2_0190_45 HRGMv2_0190_45_9 12826 15882 + GH13 | GH13_46
Gene ID: HRGMv2_0190_45_2
Type: TC
Location: 797 - 2167 (-)
Gene ID: HRGMv2_0190_45_3
Type: TC
Location: 2366 - 3700 (+)
Gene ID: HRGMv2_0190_45_4
Type: TC
Location: 3721 - 6756 (+)
Gene ID: HRGMv2_0190_45_5
Type:
Location: 6770 - 7171 (+)
Gene ID: HRGMv2_0190_45_6
Type: TC
Location: 7298 - 8374 (+)
Gene ID: HRGMv2_0190_45_7
Type: pfam
Location: 8381 - 10729 (+)
Gene ID: HRGMv2_0190_45_8
Type: CAZyme
Location: 10807 - 12810 (+)
Gene ID: HRGMv2_0190_45_9
Type: CAZyme
Location: 12826 - 15882 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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