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Cluster: HRGMv2_0190_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0190_41 HRGMv2_0190_41_7 7155 8846 - GH123
pfam HRGMv2_0190_41 HRGMv2_0190_41_8 8861 10057 - BACON
CAZyme HRGMv2_0190_41 HRGMv2_0190_41_9 10076 11764 - GH123
pfam HRGMv2_0190_41 HRGMv2_0190_41_10 11777 13738 - SusD_RagB | SusD-like_3
TC HRGMv2_0190_41 HRGMv2_0190_41_11 13751 17203 - 1.B.14.6.1
STP HRGMv2_0190_41 HRGMv2_0190_41_12 17299 18309 - FecR
STP HRGMv2_0190_41 HRGMv2_0190_41_13 18302 18883 - Sigma70_r2 | Sigma70_r4_2
CAZyme HRGMv2_0190_41 HRGMv2_0190_41_14 19446 21140 - GH123
Gene ID: HRGMv2_0190_41_7
Type: CAZyme
Location: 7155 - 8846 (-)
Gene ID: HRGMv2_0190_41_8
Type: pfam
Location: 8861 - 10057 (-)
Gene ID: HRGMv2_0190_41_9
Type: CAZyme
Location: 10076 - 11764 (-)
Gene ID: HRGMv2_0190_41_10
Type: pfam
Location: 11777 - 13738 (-)
Gene ID: HRGMv2_0190_41_11
Type: TC
Location: 13751 - 17203 (-)
Gene ID: HRGMv2_0190_41_12
Type: STP
Location: 17299 - 18309 (-)
Gene ID: HRGMv2_0190_41_13
Type: STP
Location: 18302 - 18883 (-)
Gene ID: HRGMv2_0190_41_14
Type: CAZyme
Location: 19446 - 21140 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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