Cluster: HRGMv2_0190_CGC10
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0190
- CGC Family ID: CGCFAM_09534
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0190_7 | HRGMv2_0190_7_6 | 9257 | 11500 | - | CBM67 | GH78 |
| pfam | HRGMv2_0190_7 | HRGMv2_0190_7_7 | 11690 | 13048 | + | OEP | OEP |
| pfam | HRGMv2_0190_7 | HRGMv2_0190_7_8 | 13038 | 14219 | + | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | HRGMv2_0190_7 | HRGMv2_0190_7_9 | 14223 | 14966 | + | 3.A.1.122.2 |
| TC | HRGMv2_0190_7 | HRGMv2_0190_7_10 | 15026 | 16246 | + | 3.A.1.122.1 |
| pfam | HRGMv2_0190_7 | HRGMv2_0190_7_11 | 16474 | 16989 | - | Acetyltransf_1 | Acetyltransf_3 |
| NULL(UNKNOWN) | HRGMv2_0190_7 | HRGMv2_0190_7_12 | 17667 | 18305 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0190_7 | HRGMv2_0190_7_13 | 18317 | 19348 | + | 8.A.59.2.1 |
| TF | HRGMv2_0190_7 | HRGMv2_0190_7_14 | 19345 | 20310 | + | LytTR |
| pfam | HRGMv2_0190_7 | HRGMv2_0190_7_15 | 20392 | 20973 | - | Formyl_trans_N |
| TC | HRGMv2_0190_7 | HRGMv2_0190_7_16 | 20985 | 23630 | - | 1.A.23.1.1 |
| NULL(UNKNOWN) | HRGMv2_0190_7 | HRGMv2_0190_7_17 | 23724 | 24563 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0190_7 | HRGMv2_0190_7_18 | 24792 | 27140 | - | GH3 |
| STP | HRGMv2_0190_7 | HRGMv2_0190_7_19 | 27259 | 28527 | - | Peptidase_M23 |
| NULL(UNKNOWN) | HRGMv2_0190_7 | HRGMv2_0190_7_20 | 28553 | 28684 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0190_7 | HRGMv2_0190_7_21 | 28726 | 31146 | + | 1.B.14.6.12 |
Gene ID: HRGMv2_0190_7_6
Type: CAZyme
Location: 9257 - 11500 (-)
Type: CAZyme
Location: 9257 - 11500 (-)
Gene ID: HRGMv2_0190_7_7
Type: pfam
Location: 11690 - 13048 (+)
Type: pfam
Location: 11690 - 13048 (+)
Gene ID: HRGMv2_0190_7_8
Type: pfam
Location: 13038 - 14219 (+)
Type: pfam
Location: 13038 - 14219 (+)
Gene ID: HRGMv2_0190_7_9
Type: TC
Location: 14223 - 14966 (+)
Type: TC
Location: 14223 - 14966 (+)
Gene ID: HRGMv2_0190_7_10
Type: TC
Location: 15026 - 16246 (+)
Type: TC
Location: 15026 - 16246 (+)
Gene ID: HRGMv2_0190_7_11
Type: pfam
Location: 16474 - 16989 (-)
Type: pfam
Location: 16474 - 16989 (-)
Gene ID: HRGMv2_0190_7_12
Type:
Location: 17667 - 18305 (+)
Type:
Location: 17667 - 18305 (+)
Gene ID: HRGMv2_0190_7_13
Type: TC
Location: 18317 - 19348 (+)
Type: TC
Location: 18317 - 19348 (+)
Gene ID: HRGMv2_0190_7_14
Type: TF
Location: 19345 - 20310 (+)
Type: TF
Location: 19345 - 20310 (+)
Gene ID: HRGMv2_0190_7_15
Type: pfam
Location: 20392 - 20973 (-)
Type: pfam
Location: 20392 - 20973 (-)
Gene ID: HRGMv2_0190_7_16
Type: TC
Location: 20985 - 23630 (-)
Type: TC
Location: 20985 - 23630 (-)
Gene ID: HRGMv2_0190_7_17
Type:
Location: 23724 - 24563 (+)
Type:
Location: 23724 - 24563 (+)
Gene ID: HRGMv2_0190_7_18
Type: CAZyme
Location: 24792 - 27140 (-)
Type: CAZyme
Location: 24792 - 27140 (-)
Gene ID: HRGMv2_0190_7_19
Type: STP
Location: 27259 - 28527 (-)
Type: STP
Location: 27259 - 28527 (-)
Gene ID: HRGMv2_0190_7_20
Type:
Location: 28553 - 28684 (+)
Type:
Location: 28553 - 28684 (+)
Gene ID: HRGMv2_0190_7_21
Type: TC
Location: 28726 - 31146 (+)
Type: TC
Location: 28726 - 31146 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900544195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.