Cluster: HRGMv2_0190_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0190
- CGC Family ID: CGCFAM_05169
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0190_75 | HRGMv2_0190_75_5 | 4301 | 4954 | + | 2.A.115.2.8 |
| pfam | HRGMv2_0190_75 | HRGMv2_0190_75_6 | 4998 | 5972 | + | Phage_integrase | Phage_int_SAM_1 |
| pfam | HRGMv2_0190_75 | HRGMv2_0190_75_7 | 5962 | 6255 | + | Ribosomal_S30AE |
| CAZyme | HRGMv2_0190_75 | HRGMv2_0190_75_8 | 6257 | 8524 | + | GH3 |
| pfam | HRGMv2_0190_75 | HRGMv2_0190_75_9 | 8536 | 9579 | + | DNA_pol3_delta |
| TC | HRGMv2_0190_75 | HRGMv2_0190_75_10 | 9576 | 10496 | + | 3.A.1.128.7 |
Gene ID: HRGMv2_0190_75_5
Type: TC
Location: 4301 - 4954 (+)
Type: TC
Location: 4301 - 4954 (+)
Gene ID: HRGMv2_0190_75_6
Type: pfam
Location: 4998 - 5972 (+)
Type: pfam
Location: 4998 - 5972 (+)
Gene ID: HRGMv2_0190_75_7
Type: pfam
Location: 5962 - 6255 (+)
Type: pfam
Location: 5962 - 6255 (+)
Gene ID: HRGMv2_0190_75_8
Type: CAZyme
Location: 6257 - 8524 (+)
Type: CAZyme
Location: 6257 - 8524 (+)
Gene ID: HRGMv2_0190_75_9
Type: pfam
Location: 8536 - 9579 (+)
Type: pfam
Location: 8536 - 9579 (+)
Gene ID: HRGMv2_0190_75_10
Type: TC
Location: 9576 - 10496 (+)
Type: TC
Location: 9576 - 10496 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900544195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.