Genome Details
Selected Rep_genome_ID: HRGMv2_0188
Total Genomes Found: 13
Total Genomes Found: 13
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000431015
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG454_43 | 2,749,234 | 96.27% | 0.63% | NA | Africa | H3AfricaPhase2 |
| BackhedF_2015_ERR525992_bin.32 | 2,528,570 | 95.55% | 0.634% | Sweden | Europe | ELGG |
| DM020_36 | 2,808,038 | 93.65% | 0.48% | NA | Africa | H3AfricaPhase2 |
| GCA_021617075.1_ASM2161707v1_genomic | 3,369,058 | 96.27% | 2.78% | NA | Africa | H3AfricaPhase1 |
| GCA_021618605.1_ASM2161860v1_genomic | 2,576,348 | 94.37% | 1.11% | NA | Africa | H3AfricaPhase1 |
| GCA_021621955.1_ASM2162195v1_genomic | 2,734,567 | 94.6% | 0.63% | NA | Africa | H3AfricaPhase1 |
| GCA_021625115.1_ASM2162511v1_genomic | 2,788,971 | 96.27% | 0.63% | NA | Africa | H3AfricaPhase1 |
| GCA_021625365.1_ASM2162536v1_genomic | 2,888,978 | 94.37% | 0.87% | NA | Africa | H3AfricaPhase1 |
| GCA_021634385.1_ASM2163438v1_genomic | 2,904,177 | 96.27% | 3.25% | NA | Africa | H3AfricaPhase1 |
| GCA_021635935.1_ASM2163593v1_genomic | 2,768,211 | 95.08% | 1.11% | NA | Africa | H3AfricaPhase1 |
| GCA_021638245.1_ASM2163824v1_genomic | 2,765,139 | 93.41% | 1.11% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_0188 | 2,668,016 | 95.79% | 0.158% | UK | Europe | HRGM |
| MGYG000000672 | 2,733,599 | 96.75% | 0.63% | Kazakhstan | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0188_CGC8 | CGCFAM_00001 | Yes | 6 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0188_CGC29 | CGCFAM_00016 | Yes | 5 | 2 | host glycan |
| HRGMv2_0188_CGC33 | CGCFAM_00071 | Yes | 8 | 2 | |
| HRGMv2_0188_CGC19 | CGCFAM_00128 | Yes | 7 | 2 | |
| HRGMv2_0188_CGC11 | CGCFAM_00156 | Yes | 4 | 1 | |
| HRGMv2_0188_CGC6 | CGCFAM_00439 | Yes | 9 | 2 | host glycan |
| HRGMv2_0188_CGC17 | CGCFAM_00480 | Yes | 3 | 2 | pectin/host glycan |
| HRGMv2_0188_CGC7 | CGCFAM_00535 | Yes | 10 | 2 | galactan/host glycan |
| HRGMv2_0188_CGC24 | CGCFAM_00639 | Yes | 6 | 1 | |
| HRGMv2_0188_CGC18 | CGCFAM_00860 | Yes | 3 | 1 | |
| HRGMv2_0188_CGC35 | CGCFAM_01213 | Yes | 3 | 2 | |
| HRGMv2_0188_CGC22 | CGCFAM_01638 | Yes | 3 | 2 | |
| HRGMv2_0188_CGC13 | CGCFAM_01744 | Yes | 15 | 7 | |
| HRGMv2_0188_CGC16 | CGCFAM_03604 | Yes | 5 | 1 | |
| HRGMv2_0188_CGC5 | CGCFAM_03606 | Yes | 5 | 2 | |
| HRGMv2_0188_CGC28 | CGCFAM_03728 | Yes | 9 | 3 | |
| HRGMv2_0188_CGC27 | CGCFAM_05170 | Yes | 3 | 1 | |
| HRGMv2_0188_CGC30 | CGCFAM_09530 | Yes | 7 | 3 | |
| HRGMv2_0188_CGC2 | CGCFAM_09531 | Yes | 3 | 1 | |
| HRGMv2_0188_CGC23 | CGCFAM_09533 | Yes | 17 | 1 |
Top CAZyme Families