Cluster: HRGMv2_0188_CGC13
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0188
- CGC Family ID: CGCFAM_01744
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_47 | 58364 | 60586 | - | GH97 |
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_48 | 60815 | 63451 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_49 | 63536 | 65071 | + | GH173 |
| pfam | HRGMv2_0188_7 | HRGMv2_0188_7_50 | 65071 | 65904 | + | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_51 | 65917 | 67131 | - | GH5_57 |
| NULL(UNKNOWN) | HRGMv2_0188_7 | HRGMv2_0188_7_52 | 67195 | 68997 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0188_7 | HRGMv2_0188_7_53 | 69027 | 70922 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0188_7 | HRGMv2_0188_7_54 | 70934 | 74011 | - | 1.B.14.6.1 |
| TF | HRGMv2_0188_7 | HRGMv2_0188_7_55 | 74211 | 75200 | - | LacI |
| TC | HRGMv2_0188_7 | HRGMv2_0188_7_56 | 75427 | 76602 | + | 2.A.1.7.17 |
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_57 | 76618 | 79032 | + | GH2 |
| STP | HRGMv2_0188_7 | HRGMv2_0188_7_58 | 79045 | 80016 | + | Glucokinase |
| STP | HRGMv2_0188_7 | HRGMv2_0188_7_59 | 80030 | 80608 | + | SIS |
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_60 | 80655 | 82691 | + | GH36 |
| CAZyme | HRGMv2_0188_7 | HRGMv2_0188_7_61 | 82688 | 84763 | + | GH36 |
Gene ID: HRGMv2_0188_7_47
Type: CAZyme
Location: 58364 - 60586 (-)
Type: CAZyme
Location: 58364 - 60586 (-)
Gene ID: HRGMv2_0188_7_48
Type: CAZyme
Location: 60815 - 63451 (-)
Type: CAZyme
Location: 60815 - 63451 (-)
Gene ID: HRGMv2_0188_7_49
Type: CAZyme
Location: 63536 - 65071 (+)
Type: CAZyme
Location: 63536 - 65071 (+)
Gene ID: HRGMv2_0188_7_50
Type: pfam
Location: 65071 - 65904 (+)
Type: pfam
Location: 65071 - 65904 (+)
Gene ID: HRGMv2_0188_7_51
Type: CAZyme
Location: 65917 - 67131 (-)
Type: CAZyme
Location: 65917 - 67131 (-)
Gene ID: HRGMv2_0188_7_52
Type:
Location: 67195 - 68997 (-)
Type:
Location: 67195 - 68997 (-)
Gene ID: HRGMv2_0188_7_53
Type: pfam
Location: 69027 - 70922 (-)
Type: pfam
Location: 69027 - 70922 (-)
Gene ID: HRGMv2_0188_7_54
Type: TC
Location: 70934 - 74011 (-)
Type: TC
Location: 70934 - 74011 (-)
Gene ID: HRGMv2_0188_7_55
Type: TF
Location: 74211 - 75200 (-)
Type: TF
Location: 74211 - 75200 (-)
Gene ID: HRGMv2_0188_7_56
Type: TC
Location: 75427 - 76602 (+)
Type: TC
Location: 75427 - 76602 (+)
Gene ID: HRGMv2_0188_7_57
Type: CAZyme
Location: 76618 - 79032 (+)
Type: CAZyme
Location: 76618 - 79032 (+)
Gene ID: HRGMv2_0188_7_58
Type: STP
Location: 79045 - 80016 (+)
Type: STP
Location: 79045 - 80016 (+)
Gene ID: HRGMv2_0188_7_59
Type: STP
Location: 80030 - 80608 (+)
Type: STP
Location: 80030 - 80608 (+)
Gene ID: HRGMv2_0188_7_60
Type: CAZyme
Location: 80655 - 82691 (+)
Type: CAZyme
Location: 80655 - 82691 (+)
Gene ID: HRGMv2_0188_7_61
Type: CAZyme
Location: 82688 - 84763 (+)
Type: CAZyme
Location: 82688 - 84763 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000431015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.