Cluster: HRGMv2_0188_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0188
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0188_4 | HRGMv2_0188_4_46 | 70530 | 73523 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0188_4 | HRGMv2_0188_4_47 | 73537 | 75546 | + | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0188_4 | HRGMv2_0188_4_48 | 75601 | 78786 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0188_4 | HRGMv2_0188_4_49 | 78795 | 80696 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0188_4 | HRGMv2_0188_4_50 | 80724 | 81569 | + | CBM32 |
| CAZyme | HRGMv2_0188_4 | HRGMv2_0188_4_51 | 81566 | 83854 | + | CBM32 |
Gene ID: HRGMv2_0188_4_46
Type: TC
Location: 70530 - 73523 (+)
Type: TC
Location: 70530 - 73523 (+)
Gene ID: HRGMv2_0188_4_47
Type: pfam
Location: 73537 - 75546 (+)
Type: pfam
Location: 73537 - 75546 (+)
Gene ID: HRGMv2_0188_4_48
Type: TC
Location: 75601 - 78786 (+)
Type: TC
Location: 75601 - 78786 (+)
Gene ID: HRGMv2_0188_4_49
Type: pfam
Location: 78795 - 80696 (+)
Type: pfam
Location: 78795 - 80696 (+)
Gene ID: HRGMv2_0188_4_50
Type: CAZyme
Location: 80724 - 81569 (+)
Type: CAZyme
Location: 80724 - 81569 (+)
Gene ID: HRGMv2_0188_4_51
Type: CAZyme
Location: 81566 - 83854 (+)
Type: CAZyme
Location: 81566 - 83854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp000431015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.