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Cluster: HRGMv2_0188_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0188_32 HRGMv2_0188_32_1 166 1911 - GT83
TC HRGMv2_0188_32 HRGMv2_0188_32_2 1901 2557 - 2.A.123.4.1
CAZyme HRGMv2_0188_32 HRGMv2_0188_32_3 2567 3322 - GT2
TC HRGMv2_0188_32 HRGMv2_0188_32_4 3326 4444 - 3.A.1.105.16
TC HRGMv2_0188_32 HRGMv2_0188_32_5 4449 5552 - 3.A.1.105.15
TC HRGMv2_0188_32 HRGMv2_0188_32_6 5618 6556 - 3.A.1.105.16
pfam HRGMv2_0188_32 HRGMv2_0188_32_7 6600 7970 - Aldedh
TC HRGMv2_0188_32 HRGMv2_0188_32_8 8400 9899 + 2.A.66.1.4
Gene ID: HRGMv2_0188_32_1
Type: CAZyme
Location: 166 - 1911 (-)
Gene ID: HRGMv2_0188_32_2
Type: TC
Location: 1901 - 2557 (-)
Gene ID: HRGMv2_0188_32_3
Type: CAZyme
Location: 2567 - 3322 (-)
Gene ID: HRGMv2_0188_32_4
Type: TC
Location: 3326 - 4444 (-)
Gene ID: HRGMv2_0188_32_5
Type: TC
Location: 4449 - 5552 (-)
Gene ID: HRGMv2_0188_32_6
Type: TC
Location: 5618 - 6556 (-)
Gene ID: HRGMv2_0188_32_7
Type: pfam
Location: 6600 - 7970 (-)
Gene ID: HRGMv2_0188_32_8
Type: TC
Location: 8400 - 9899 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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