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Cluster: HRGMv2_0188_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0188_21 HRGMv2_0188_21_11 9457 11442 - CE20 | CE20
TC HRGMv2_0188_21 HRGMv2_0188_21_12 11606 13894 - 1.B.14.6.1
pfam HRGMv2_0188_21 HRGMv2_0188_21_13 13924 14916 - DUF4961
NULL(UNKNOWN) HRGMv2_0188_21 HRGMv2_0188_21_14 14926 15408 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0188_21 HRGMv2_0188_21_15 15421 16890 - 8.A.46.1.3
TC HRGMv2_0188_21 HRGMv2_0188_21_16 16920 20015 - 1.B.14.6.1
pfam HRGMv2_0188_21 HRGMv2_0188_21_17 20234 21349 - DUF5005
CAZyme HRGMv2_0188_21 HRGMv2_0188_21_18 21361 23691 - GH92
CAZyme HRGMv2_0188_21 HRGMv2_0188_21_19 23693 26251 - GH38
Gene ID: HRGMv2_0188_21_11
Type: CAZyme
Location: 9457 - 11442 (-)
Gene ID: HRGMv2_0188_21_12
Type: TC
Location: 11606 - 13894 (-)
Gene ID: HRGMv2_0188_21_13
Type: pfam
Location: 13924 - 14916 (-)
Gene ID: HRGMv2_0188_21_14
Type:
Location: 14926 - 15408 (-)
Gene ID: HRGMv2_0188_21_15
Type: TC
Location: 15421 - 16890 (-)
Gene ID: HRGMv2_0188_21_16
Type: TC
Location: 16920 - 20015 (-)
Gene ID: HRGMv2_0188_21_17
Type: pfam
Location: 20234 - 21349 (-)
Gene ID: HRGMv2_0188_21_18
Type: CAZyme
Location: 21361 - 23691 (-)
Gene ID: HRGMv2_0188_21_19
Type: CAZyme
Location: 23693 - 26251 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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