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Genome Details

Selected Rep_genome_ID: DianaHT_2018_SRR6795027_bin.3
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Bacteroides
→
Species
Bacteroides sp900552405
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG511_bin.38 6,983,393 99.07% 2.55% NA Africa H3AfricaPhase2
CGMR080842 5,898,835 90.17% 0.79% China Asia CGMR
DianaHT_2018_SRR6795027_bin.3 6,782,933 99.25% 0.817% Bangladesh Asia ELGG
Rep_455 6,963,734 96.1028% 0.820895% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
DianaHT_2018_SRR6795027_bin.3_CGC61 CGCFAM_00138 Yes 12 2
DianaHT_2018_SRR6795027_bin.3_CGC70 CGCFAM_00170 Yes 8 4
DianaHT_2018_SRR6795027_bin.3_CGC76 CGCFAM_00175 Yes 9 3 alpha-glucan
PUL0540_DianaHT_2018_SRR6795027_bin.3_C1 CGCFAM_00175 Yes 6 3 alpha-glucan
DianaHT_2018_SRR6795027_bin.3_CGC112 CGCFAM_00212 Yes 16 10 arabinogalactan/pectin
DianaHT_2018_SRR6795027_bin.3_CGC25 CGCFAM_00217 Yes 40 23
DianaHT_2018_SRR6795027_bin.3_CGC100 CGCFAM_00239 Yes 12 7 xylan
PUL0643_DianaHT_2018_SRR6795027_bin.3_C1 CGCFAM_00239 Yes 12 7 xylan
DianaHT_2018_SRR6795027_bin.3_CGC35 CGCFAM_00253 Yes 9 3
DianaHT_2018_SRR6795027_bin.3_CGC41 CGCFAM_00297 Yes 10 3
DianaHT_2018_SRR6795027_bin.3_CGC62 CGCFAM_00298 Yes 20 8 pectin
DianaHT_2018_SRR6795027_bin.3_CGC34 CGCFAM_00301 Yes 3 1
DianaHT_2018_SRR6795027_bin.3_CGC106 CGCFAM_00361 Yes 5 2
DianaHT_2018_SRR6795027_bin.3_CGC82 CGCFAM_00478 Yes 4 1
DianaHT_2018_SRR6795027_bin.3_CGC71 CGCFAM_00542 Yes 10 4
DianaHT_2018_SRR6795027_bin.3_CGC85 CGCFAM_00547 Yes 8 1
DianaHT_2018_SRR6795027_bin.3_CGC74 CGCFAM_00584 Yes 9 3
DianaHT_2018_SRR6795027_bin.3_CGC2 CGCFAM_00602 Yes 5 1
PUL0535_DianaHT_2018_SRR6795027_bin.3_C0 CGCFAM_00646 Yes 8 3 arabinogalactan
DianaHT_2018_SRR6795027_bin.3_CGC113 CGCFAM_00656 Yes 9 3
DianaHT_2018_SRR6795027_bin.3_CGC114 CGCFAM_00669 Yes 6 3
DianaHT_2018_SRR6795027_bin.3_CGC16 CGCFAM_00676 Yes 19 8
DianaHT_2018_SRR6795027_bin.3_CGC93 CGCFAM_00722 Yes 11 6 beta-mannan
PUL0547_DianaHT_2018_SRR6795027_bin.3_C0 CGCFAM_00722 Yes 11 6 beta-mannan
PUL0532_DianaHT_2018_SRR6795027_bin.3_C0 CGCFAM_00723 Yes 14 4 arabinogalactan
Top CAZyme Families