Cluster: DianaHT_2018_SRR6795027_bin.3_CGC112
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate: arabinogalactan/pectin
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00212
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_5 | 6240 | 8831 | + | GH95 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_6 | 8846 | 10123 | + | GH105 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_7 | 10024 | 10278 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_8 | 10412 | 11878 | + | GH140 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_9 | 11972 | 12187 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_10 | 12230 | 16096 | + | CBM67 | GH33 | GH78 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_11 | 16174 | 18135 | - | CE19 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_12 | 18150 | 19493 | - | GH28 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_13 | 19505 | 22300 | - | CBM67 | GH78 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_14 | 22481 | 22570 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_15 | 22567 | 25887 | - | GH142 | GH143 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_16 | 25917 | 26846 | - | GH43_18 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_17 | 27000 | 27671 | - | DUF3826 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_18 | 27674 | 29401 | - | PL1_2 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_19 | 29587 | 31668 | - | SusD_RagB | SusD-like_3 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_15137 | DianaHT_2018_SRR6795027_bin.3_k141_15137_20 | 31699 | 35100 | - | 1.B.14.6.1 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_5
Type: CAZyme
Location: 6240 - 8831 (+)
Type: CAZyme
Location: 6240 - 8831 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_6
Type: CAZyme
Location: 8846 - 10123 (+)
Type: CAZyme
Location: 8846 - 10123 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_7
Type:
Location: 10024 - 10278 (-)
Type:
Location: 10024 - 10278 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_8
Type: CAZyme
Location: 10412 - 11878 (+)
Type: CAZyme
Location: 10412 - 11878 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_9
Type:
Location: 11972 - 12187 (+)
Type:
Location: 11972 - 12187 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_10
Type: CAZyme
Location: 12230 - 16096 (+)
Type: CAZyme
Location: 12230 - 16096 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_11
Type: CAZyme
Location: 16174 - 18135 (-)
Type: CAZyme
Location: 16174 - 18135 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_12
Type: CAZyme
Location: 18150 - 19493 (-)
Type: CAZyme
Location: 18150 - 19493 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_13
Type: CAZyme
Location: 19505 - 22300 (-)
Type: CAZyme
Location: 19505 - 22300 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_14
Type:
Location: 22481 - 22570 (-)
Type:
Location: 22481 - 22570 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_15
Type: CAZyme
Location: 22567 - 25887 (-)
Type: CAZyme
Location: 22567 - 25887 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_16
Type: CAZyme
Location: 25917 - 26846 (-)
Type: CAZyme
Location: 25917 - 26846 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_17
Type: pfam
Location: 27000 - 27671 (-)
Type: pfam
Location: 27000 - 27671 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_18
Type: CAZyme
Location: 27674 - 29401 (-)
Type: CAZyme
Location: 27674 - 29401 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_19
Type: pfam
Location: 29587 - 31668 (-)
Type: pfam
Location: 29587 - 31668 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_15137_20
Type: TC
Location: 31699 - 35100 (-)
Type: TC
Location: 31699 - 35100 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_15137_5 | vegetarian > omnivore | 1.55734 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_15137_5 | vegetarian > vegan | 1.24746 | 0.01693 |
| DianaHT_2018_SRR6795027_bin.3_k141_15137_7 | vegan > omnivore | 1.52929 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_15137_7 | vegetarian > omnivore | 2.10185 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_15137_10 | vegetarian > omnivore | 1.48745 | 0.00085 |