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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_99 116037 116858 + 2.A.64.3.2
pfam DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_100 116858 120250 + AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_101 120718 122262 - 2.A.1.14.2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_102 122564 123784 + GH105
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_103 123789 124757 + CE8
pfam DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_104 124872 125219 - Cupin_2
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_105 125366 127132 + CE12 | CE8
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_106 127178 128494 + CE7
TC DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_107 128760 132101 + 1.B.14.6.1
pfam DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_108 132133 134262 + SusD_RagB | SusD-like_3
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_109 134374 135525 + CE19
TF DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_110 135936 140357 - HTH_AraC | HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_111 140382 141536 - CE19
TF DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_112 141619 146094 + HTH_AraC
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_113 146323 147732 - GH140
pfam DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_114 148160 149707 - DUF4957 | DUF5123
TC DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_115 149728 151548 - 8.A.46.1.2
TC DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_116 151570 154794 - 1.B.14.6.1
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_2139 DianaHT_2018_SRR6795027_bin.3_k141_2139_117 155076 157556 - GH95
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_99
Type: TC
Location: 116037 - 116858 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_100
Type: pfam
Location: 116858 - 120250 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_101
Type: TC
Location: 120718 - 122262 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_102
Type: CAZyme
Location: 122564 - 123784 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_103
Type: CAZyme
Location: 123789 - 124757 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_104
Type: pfam
Location: 124872 - 125219 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_105
Type: CAZyme
Location: 125366 - 127132 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_106
Type: CAZyme
Location: 127178 - 128494 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_107
Type: TC
Location: 128760 - 132101 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_108
Type: pfam
Location: 132133 - 134262 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_109
Type: CAZyme
Location: 134374 - 135525 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_110
Type: TF
Location: 135936 - 140357 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_111
Type: CAZyme
Location: 140382 - 141536 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_112
Type: TF
Location: 141619 - 146094 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_113
Type: CAZyme
Location: 146323 - 147732 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_114
Type: pfam
Location: 148160 - 149707 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_115
Type: TC
Location: 149728 - 151548 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_116
Type: TC
Location: 151570 - 154794 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_2139_117
Type: CAZyme
Location: 155076 - 157556 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_2139_103 vegetarian > vegan 1.24479 0.01693
DianaHT_2018_SRR6795027_bin.3_k141_2139_103 vegetarian > omnivore 2.55392 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_103 vegan > omnivore 1.30913 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_2139_104 vegan > omnivore 1.58272 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_2139_104 vegetarian > omnivore 1.24287 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_105 vegan > omnivore 1.19838 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_2139_105 vegetarian > omnivore 1.65689 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_107 vegetarian > omnivore 1.08704 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_107 vegan > omnivore 1.13246 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_2139_108 vegetarian > omnivore 1.79899 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_108 vegan > omnivore 1.49390 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_2139_109 vegetarian > omnivore 1.40628 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_110 vegetarian > omnivore 1.20272 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_2139_110 vegan > omnivore 1.40937 0.01168

🧭 Explore Read Mapping of CGC

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