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Cluster: DianaHT_2018_SRR6795027_bin.3_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_149 214173 215636 - GT2
pfam DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_150 215669 217528 - Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_151 217543 220650 - NULL(UNKNOWN)
[View Structural Homologs]
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_152 220673 222121 - 2.A.21.3.7
CAZyme DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_153 222156 223322 - GH171
pfam DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_154 223501 224607 + GHL10 | DUF4015
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_155 224691 225734 - NULL(UNKNOWN)
[View Structural Homologs]
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_156 225815 227467 - 8.A.46.2.2
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_157 227481 230588 - 1.B.14.6.2
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_158 230757 230873 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_159 231676 232524 + NULL(UNKNOWN)
[View Structural Homologs]
TC DianaHT_2018_SRR6795027_bin.3_k141_6819 DianaHT_2018_SRR6795027_bin.3_k141_6819_160 232958 236437 + 1.B.14.6.1
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_149
Type: CAZyme
Location: 214173 - 215636 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_150
Type: pfam
Location: 215669 - 217528 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_151
Type:
Location: 217543 - 220650 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_152
Type: TC
Location: 220673 - 222121 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_153
Type: CAZyme
Location: 222156 - 223322 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_154
Type: pfam
Location: 223501 - 224607 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_155
Type:
Location: 224691 - 225734 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_156
Type: TC
Location: 225815 - 227467 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_157
Type: TC
Location: 227481 - 230588 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_158
Type:
Location: 230757 - 230873 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_159
Type:
Location: 231676 - 232524 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_160
Type: TC
Location: 232958 - 236437 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_6819_154 vegan > omnivore 2.40921 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_6819_154 vegetarian > omnivore 2.35916 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_155 vegan > omnivore 1.26952 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_6819_155 vegetarian > omnivore 1.19320 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_156 vegan > omnivore 1.49217 0.01168
DianaHT_2018_SRR6795027_bin.3_k141_6819_156 vegetarian > omnivore 1.75759 0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_158 vegan > omnivore 2.09099 0.01168

🧭 Explore Read Mapping of CGC

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