Cluster: DianaHT_2018_SRR6795027_bin.3_CGC71
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00542
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_35 | 43211 | 44488 | - | CE12 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_36 | 44785 | 45912 | - | GH105 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_37 | 46125 | 48200 | + | GH42 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_38 | 48402 | 50018 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_39 | 50031 | 51185 | - | DUF4249 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_40 | 51192 | 53924 | - | 1.B.14.6.12 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_41 | 53927 | 54616 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_42 | 55015 | 58146 | + | 1.B.14.6.1 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_43 | 58173 | 60257 | + | SusD_RagB | SusD-like_3 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_44 | 60471 | 63920 | + | GH105 | PL11_1 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_35
Type: CAZyme
Location: 43211 - 44488 (-)
Type: CAZyme
Location: 43211 - 44488 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_36
Type: CAZyme
Location: 44785 - 45912 (-)
Type: CAZyme
Location: 44785 - 45912 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_37
Type: CAZyme
Location: 46125 - 48200 (+)
Type: CAZyme
Location: 46125 - 48200 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_38
Type:
Location: 48402 - 50018 (-)
Type:
Location: 48402 - 50018 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_39
Type: pfam
Location: 50031 - 51185 (-)
Type: pfam
Location: 50031 - 51185 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_40
Type: TC
Location: 51192 - 53924 (-)
Type: TC
Location: 51192 - 53924 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_41
Type:
Location: 53927 - 54616 (-)
Type:
Location: 53927 - 54616 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_42
Type: TC
Location: 55015 - 58146 (+)
Type: TC
Location: 55015 - 58146 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_43
Type: pfam
Location: 58173 - 60257 (+)
Type: pfam
Location: 58173 - 60257 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_44
Type: CAZyme
Location: 60471 - 63920 (+)
Type: CAZyme
Location: 60471 - 63920 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_8917_36 | vegan > omnivore | 1.53836 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_36 | vegetarian > omnivore | 1.90917 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_41 | vegan > omnivore | 2.54234 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_41 | vegetarian > omnivore | 1.70120 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_43 | vegan > omnivore | 1.31440 | 0.00989 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_43 | vegetarian > omnivore | 1.08489 | 0.00085 |