Cluster: DianaHT_2018_SRR6795027_bin.3_CGC70
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00170
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_23 | 32437 | 33261 | + | GT5 |
| pfam | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_24 | 33282 | 34823 | + | DUF4270 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_25 | 34900 | 36318 | - | GH57 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_26 | 36337 | 37608 | - | GT4 |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_27 | 37623 | 39563 | - | GH133 |
| NULL(UNKNOWN) | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_28 | 39601 | 39720 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_29 | 39755 | 40456 | + | 9.B.104.3.2 |
| TC | DianaHT_2018_SRR6795027_bin.3_k141_8917 | DianaHT_2018_SRR6795027_bin.3_k141_8917_30 | 40451 | 41077 | - | 2.A.124.1.4 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_23
Type: CAZyme
Location: 32437 - 33261 (+)
Type: CAZyme
Location: 32437 - 33261 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_24
Type: pfam
Location: 33282 - 34823 (+)
Type: pfam
Location: 33282 - 34823 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_25
Type: CAZyme
Location: 34900 - 36318 (-)
Type: CAZyme
Location: 34900 - 36318 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_26
Type: CAZyme
Location: 36337 - 37608 (-)
Type: CAZyme
Location: 36337 - 37608 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_27
Type: CAZyme
Location: 37623 - 39563 (-)
Type: CAZyme
Location: 37623 - 39563 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_28
Type:
Location: 39601 - 39720 (+)
Type:
Location: 39601 - 39720 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_29
Type: TC
Location: 39755 - 40456 (+)
Type: TC
Location: 39755 - 40456 (+)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_8917_30
Type: TC
Location: 40451 - 41077 (-)
Type: TC
Location: 40451 - 41077 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_8917_24 | vegan > omnivore | 2.18937 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_24 | vegetarian > omnivore | 1.64721 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_29 | vegan > omnivore | 1.60430 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_29 | vegetarian > omnivore | 1.42373 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_30 | vegan > omnivore | 2.56731 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_8917_30 | vegetarian > omnivore | 2.74630 | 0.00085 |