dbCAN HGM

Cluster: DianaHT_2018_SRR6795027_bin.3_CGC62

Cluster Details
Gene Composition
Taxonomic Lineage
Gene level Read Mapping
Explore Read Mapping

🧬 Cluster Details

Gene Count: 20
CAZyme Count: 8
Substrate: pectin
Genome ID: DianaHT_2018_SRR6795027_bin.3
CGC Family ID: CGCFAM_00298
Continent: Asia
Source Study: Zeng et al., 2022 →

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_279	377235	379766	+	CE20 \| GH105
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_280	379775	382603	+	GH106
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_281	382747	384576	+	PL11
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_282	384614	386137	+	GH28
pfam	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_283	386257	387714	+	FGGY_N \| FGGY_C
pfam	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_284	387781	389031	+	RhaA
TC	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_285	389232	390263	+	2.A.7.6.1
pfam	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_286	390365	391174	+	Aldolase_II
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_287	391244	392542	+	GH105
TF	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_288	392676	393602	+	HTH_AraC
TC	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_289	393846	397079	+	1.B.14.6.1
TC	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_290	397093	399192	+	8.A.46.1.3
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_291	399416	400879	+	PL1_2
NULL(UNKNOWN)	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_292	400907	402778	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_293	402797	404065	+	GH43
sulfatase	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_294	404296	404550	+	S1_20
TC	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_295	404874	408080	+	1.B.14.6.1
sulfatase	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_296	408095	410092	+	S1_27
CAZyme	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_297	410222	411604	+	PL1_2
TC	DianaHT_2018_SRR6795027_bin.3_k141_6819	DianaHT_2018_SRR6795027_bin.3_k141_6819_298	411745	414123	+	1.B.14.3.6

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_279
Type: CAZyme
Location: 377235 - 379766 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_280
Type: CAZyme
Location: 379775 - 382603 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_281
Type: CAZyme
Location: 382747 - 384576 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_282
Type: CAZyme
Location: 384614 - 386137 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_283
Type: pfam
Location: 386257 - 387714 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_284
Type: pfam
Location: 387781 - 389031 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_285
Type: TC
Location: 389232 - 390263 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_286
Type: pfam
Location: 390365 - 391174 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_287
Type: CAZyme
Location: 391244 - 392542 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_288
Type: TF
Location: 392676 - 393602 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_289
Type: TC
Location: 393846 - 397079 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_290
Type: TC
Location: 397093 - 399192 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_291
Type: CAZyme
Location: 399416 - 400879 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_292
Type:
Location: 400907 - 402778 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_293
Type: CAZyme
Location: 402797 - 404065 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_294
Type: sulfatase
Location: 404296 - 404550 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_295
Type: TC
Location: 404874 - 408080 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_296
Type: sulfatase
Location: 408095 - 410092 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_297
Type: CAZyme
Location: 410222 - 411604 (+)

Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_6819_298
Type: TC
Location: 411745 - 414123 (+)

Taxonomic Lineage

Domain

Bacteria

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Phylum

Bacteroidota

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Class

Bacteroidia

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Order

Bacteroidales

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Family

Bacteroidaceae

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Genus

Bacteroides

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Species

Bacteroides sp900552405

Gene Level Read Mapping

Diet (De Filippis et al., 2019)
Diet (Huang et al., 2024)
IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID	Condition Pair	log2FC	FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_6819_279	vegetarian > omnivore	1.09011	0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_283	vegan > omnivore	1.25003	0.00989
DianaHT_2018_SRR6795027_bin.3_k141_6819_283	vegetarian > omnivore	1.21775	0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_285	vegetarian > omnivore	1.71093	0.00085
DianaHT_2018_SRR6795027_bin.3_k141_6819_287	vegetarian > omnivore	1.22414	0.00085

Gene ID	Condition Pair	log2FC	FDR P-value
DianaHT_2018_SRR6795027_bin.3_k141_6819_295	vegan > omnivore	3.04032	0.00072
DianaHT_2018_SRR6795027_bin.3_k141_6819_296	vegan > omnivore	4.69716	0.00072
DianaHT_2018_SRR6795027_bin.3_k141_6819_297	vegan > omnivore	4.00806	0.00072

🧭 Explore Read Mapping of CGC

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