Cluster: DianaHT_2018_SRR6795027_bin.3_CGC82
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: DianaHT_2018_SRR6795027_bin.3
- CGC Family ID: CGCFAM_00478
- Continent: Asia
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | DianaHT_2018_SRR6795027_bin.3_k141_9925 | DianaHT_2018_SRR6795027_bin.3_k141_9925_84 | 100851 | 104057 | - | 1.B.14.6.1 |
| STP | DianaHT_2018_SRR6795027_bin.3_k141_9925 | DianaHT_2018_SRR6795027_bin.3_k141_9925_85 | 104104 | 104619 | - | Sigma70_r2 | Sigma70_r4_2 |
| TF | DianaHT_2018_SRR6795027_bin.3_k141_9925 | DianaHT_2018_SRR6795027_bin.3_k141_9925_86 | 104915 | 107731 | - | HTH_AraC |
| CAZyme | DianaHT_2018_SRR6795027_bin.3_k141_9925 | DianaHT_2018_SRR6795027_bin.3_k141_9925_87 | 108007 | 110757 | - | PL40 |
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_84
Type: TC
Location: 100851 - 104057 (-)
Type: TC
Location: 100851 - 104057 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_85
Type: STP
Location: 104104 - 104619 (-)
Type: STP
Location: 104104 - 104619 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_86
Type: TF
Location: 104915 - 107731 (-)
Type: TF
Location: 104915 - 107731 (-)
Gene ID: DianaHT_2018_SRR6795027_bin.3_k141_9925_87
Type: CAZyme
Location: 108007 - 110757 (-)
Type: CAZyme
Location: 108007 - 110757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900552405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| DianaHT_2018_SRR6795027_bin.3_k141_9925_84 | vegan > omnivore | 1.42930 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_9925_84 | vegetarian > omnivore | 1.11315 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_9925_85 | vegan > omnivore | 2.42610 | 0.00989 |
| DianaHT_2018_SRR6795027_bin.3_k141_9925_85 | vegetarian > omnivore | 1.15306 | 0.00085 |
| DianaHT_2018_SRR6795027_bin.3_k141_9925_86 | vegan > omnivore | 1.17325 | 0.01168 |
| DianaHT_2018_SRR6795027_bin.3_k141_9925_86 | vegetarian > omnivore | 1.86662 | 0.00085 |