Genome Details
Selected Rep_genome_ID: CGMR088541
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR088541 | 3,930,847 | 96.46% | 0.73% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR088541_CGC19 | CGCFAM_00012 | Yes | 6 | 1 | host glycan/beta-glucan |
| CGMR088541_CGC7 | CGCFAM_00162 | Yes | 3 | 2 | |
| CGMR088541_CGC22 | CGCFAM_00205 | Yes | 3 | 1 | |
| CGMR088541_CGC30 | CGCFAM_00550 | Yes | 5 | 2 | |
| CGMR088541_CGC5 | CGCFAM_02341 | Yes | 4 | 1 | |
| CGMR088541_CGC14 | CGCFAM_02739 | Yes | 6 | 1 | |
| CGMR088541_CGC25 | CGCFAM_04155 | Yes | 4 | 1 | |
| CGMR088541_CGC31 | CGCFAM_05266 | Yes | 6 | 1 | |
| CGMR088541_CGC6 | CGCFAM_05460 | Yes | 15 | 6 | |
| CGMR088541_CGC11 | CGCFAM_07134 | Yes | 7 | 3 | |
| CGMR088541_CGC28 | CGCFAM_07913 | Yes | 5 | 1 | |
| CGMR088541_CGC8 | CGCFAM_09101 | Yes | 5 | 1 |
Top CAZyme Families