Cluster: CGMR088541_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR088541
- CGC Family ID: CGCFAM_07134
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_7478 | k141_7478_1 | 2 | 1423 | - | GH1 |
| TC | k141_7478 | k141_7478_2 | 1484 | 3412 | - | 4.A.1.2.6 |
| pfam | k141_7478 | k141_7478_3 | 3557 | 4399 | - | PRD | PRD | CAT_RBD |
| TC | k141_7478 | k141_7478_4 | 4746 | 6110 | - | 4.A.1.2.3 |
| pfam | k141_7478 | k141_7478_5 | 6149 | 6820 | - | Hydrolase | HAD_2 |
| CAZyme | k141_7478 | k141_7478_6 | 6822 | 9212 | - | GH65 |
| CAZyme | k141_7478 | k141_7478_7 | 9238 | 10686 | - | GH1 |
Gene ID: k141_7478_1
Type: CAZyme
Location: 2 - 1423 (-)
Type: CAZyme
Location: 2 - 1423 (-)
Gene ID: k141_7478_2
Type: TC
Location: 1484 - 3412 (-)
Type: TC
Location: 1484 - 3412 (-)
Gene ID: k141_7478_3
Type: pfam
Location: 3557 - 4399 (-)
Type: pfam
Location: 3557 - 4399 (-)
Gene ID: k141_7478_4
Type: TC
Location: 4746 - 6110 (-)
Type: TC
Location: 4746 - 6110 (-)
Gene ID: k141_7478_5
Type: pfam
Location: 6149 - 6820 (-)
Type: pfam
Location: 6149 - 6820 (-)
Gene ID: k141_7478_6
Type: CAZyme
Location: 6822 - 9212 (-)
Type: CAZyme
Location: 6822 - 9212 (-)
Gene ID: k141_7478_7
Type: CAZyme
Location: 9238 - 10686 (-)
Type: CAZyme
Location: 9238 - 10686 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.