Cluster: CGMR088541_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR088541
- CGC Family ID: CGCFAM_00550
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18749 | k141_18749_1 | 1 | 687 | - | 2.A.79.1.5 |
| STP | k141_18749 | k141_18749_2 | 1015 | 2259 | + | Aminotran_1_2 |
| CAZyme | k141_18749 | k141_18749_3 | 2582 | 3679 | + | GT28 |
| CAZyme | k141_18749 | k141_18749_4 | 3670 | 4368 | + | CE4 |
| TC | k141_18749 | k141_18749_5 | 4371 | 5435 | + | 4.D.2.1.5 |
Gene ID: k141_18749_1
Type: TC
Location: 1 - 687 (-)
Type: TC
Location: 1 - 687 (-)
Gene ID: k141_18749_2
Type: STP
Location: 1015 - 2259 (+)
Type: STP
Location: 1015 - 2259 (+)
Gene ID: k141_18749_3
Type: CAZyme
Location: 2582 - 3679 (+)
Type: CAZyme
Location: 2582 - 3679 (+)
Gene ID: k141_18749_4
Type: CAZyme
Location: 3670 - 4368 (+)
Type: CAZyme
Location: 3670 - 4368 (+)
Gene ID: k141_18749_5
Type: TC
Location: 4371 - 5435 (+)
Type: TC
Location: 4371 - 5435 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.