Cluster: CGMR088541_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088541
- CGC Family ID: CGCFAM_04155
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_7124 | k141_7124_3 | 3863 | 4189 | + | 4.A.3.2.2 |
| TC | k141_7124 | k141_7124_4 | 4205 | 5494 | + | 4.A.3.2.6 |
| pfam | k141_7124 | k141_7124_5 | 5518 | 5847 | + | PTS_IIA |
| CAZyme | k141_7124 | k141_7124_6 | 5995 | 7323 | + | GH4 |
Gene ID: k141_7124_3
Type: TC
Location: 3863 - 4189 (+)
Type: TC
Location: 3863 - 4189 (+)
Gene ID: k141_7124_4
Type: TC
Location: 4205 - 5494 (+)
Type: TC
Location: 4205 - 5494 (+)
Gene ID: k141_7124_5
Type: pfam
Location: 5518 - 5847 (+)
Type: pfam
Location: 5518 - 5847 (+)
Gene ID: k141_7124_6
Type: CAZyme
Location: 5995 - 7323 (+)
Type: CAZyme
Location: 5995 - 7323 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.