Cluster: CGMR088541_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088541
- CGC Family ID: CGCFAM_02739
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_9395 | k141_9395_2 | 601 | 972 | + | 1.E.14.1.16 |
| TC | k141_9395 | k141_9395_3 | 965 | 1654 | + | 2.A.122.1.6 |
| TC | k141_9395 | k141_9395_4 | 2174 | 3040 | + | 2.A.115.1.1 |
| pfam | k141_9395 | k141_9395_5 | 3282 | 4091 | + | MORN | MORN | MORN | MORN | MORN | MORN | MORN | MORN |
| pfam | k141_9395 | k141_9395_6 | 4235 | 5299 | + | CAP | CAP_assoc_N |
| CAZyme | k141_9395 | k141_9395_7 | 5327 | 6046 | + | CE4 |
Gene ID: k141_9395_2
Type: TC
Location: 601 - 972 (+)
Type: TC
Location: 601 - 972 (+)
Gene ID: k141_9395_3
Type: TC
Location: 965 - 1654 (+)
Type: TC
Location: 965 - 1654 (+)
Gene ID: k141_9395_4
Type: TC
Location: 2174 - 3040 (+)
Type: TC
Location: 2174 - 3040 (+)
Gene ID: k141_9395_5
Type: pfam
Location: 3282 - 4091 (+)
Type: pfam
Location: 3282 - 4091 (+)
Gene ID: k141_9395_6
Type: pfam
Location: 4235 - 5299 (+)
Type: pfam
Location: 4235 - 5299 (+)
Gene ID: k141_9395_7
Type: CAZyme
Location: 5327 - 6046 (+)
Type: CAZyme
Location: 5327 - 6046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.