Cluster: CGMR088541_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR088541
- CGC Family ID: CGCFAM_05266
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_45507 | k141_45507_9 | 9611 | 10465 | - | 2.A.7.5.5 |
| TF | k141_45507 | k141_45507_10 | 10631 | 12595 | + | HTH_11 | Mga |
| TC | k141_45507 | k141_45507_11 | 12595 | 13056 | + | 4.A.2.1.7 |
| TC | k141_45507 | k141_45507_12 | 13059 | 13379 | + | 4.A.2.1.10 |
| TC | k141_45507 | k141_45507_13 | 13395 | 14495 | + | 4.A.2.1.10 |
| CAZyme | k141_45507 | k141_45507_14 | 14615 | 17215 | + | GH38 |
Gene ID: k141_45507_9
Type: TC
Location: 9611 - 10465 (-)
Type: TC
Location: 9611 - 10465 (-)
Gene ID: k141_45507_10
Type: TF
Location: 10631 - 12595 (+)
Type: TF
Location: 10631 - 12595 (+)
Gene ID: k141_45507_11
Type: TC
Location: 12595 - 13056 (+)
Type: TC
Location: 12595 - 13056 (+)
Gene ID: k141_45507_12
Type: TC
Location: 13059 - 13379 (+)
Type: TC
Location: 13059 - 13379 (+)
Gene ID: k141_45507_13
Type: TC
Location: 13395 - 14495 (+)
Type: TC
Location: 13395 - 14495 (+)
Gene ID: k141_45507_14
Type: CAZyme
Location: 14615 - 17215 (+)
Type: CAZyme
Location: 14615 - 17215 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Species
Clostridioides difficile
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.