Genome Details
Selected Rep_genome_ID: CGMR087432
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus paracasei
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B15.bin_13 | 2,882,550 | 97.83% | 0.62% | China(Inner Mongolia) | Asia | IMGG |
| CGMR087432 | 2,872,019 | 99.46% | 0% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR087432_CGC7 | CGCFAM_00006 | Yes | 12 | 4 | |
| CGMR087432_CGC12 | CGCFAM_00020 | Yes | 7 | 1 | host glycan/beta-glucan |
| CGMR087432_CGC25 | CGCFAM_00176 | Yes | 6 | 1 | beta-glucan |
| CGMR087432_CGC19 | CGCFAM_00336 | Yes | 9 | 4 | alpha-glucan |
| CGMR087432_CGC2 | CGCFAM_00405 | Yes | 9 | 3 | host glycan |
| CGMR087432_CGC28 | CGCFAM_00486 | Yes | 6 | 2 | |
| CGMR087432_CGC15 | CGCFAM_00575 | Yes | 5 | 1 | host glycan |
| CGMR087432_CGC24 | CGCFAM_01470 | Yes | 5 | 2 | fructan |
| CGMR087432_CGC34 | CGCFAM_02932 | Yes | 9 | 3 | |
| CGMR087432_CGC14 | CGCFAM_03600 | Yes | 6 | 1 | |
| CGMR087432_CGC1 | CGCFAM_05177 | Yes | 8 | 3 | |
| CGMR087432_CGC29 | CGCFAM_05682 | Yes | 5 | 1 | |
| CGMR087432_CGC8 | CGCFAM_05683 | Yes | 4 | 1 | |
| CGMR087432_CGC3 | CGCFAM_06383 | Yes | 15 | 4 | |
| CGMR087432_CGC23 | CGCFAM_07401 | Yes | 12 | 6 | |
| CGMR087432_CGC11 | CGCFAM_08775 | Yes | 9 | 3 | |
| CGMR087432_CGC16 | CGCFAM_08776 | Yes | 8 | 1 | |
| CGMR087432_CGC20 | CGCFAM_08778 | Yes | 8 | 3 |
Top CAZyme Families