Cluster: CGMR087432_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR087432
- CGC Family ID: CGCFAM_07401
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_7185 | k141_7185_8 | 8314 | 9033 | - | 3.A.1.15.5 |
| NULL(UNKNOWN) | k141_7185 | k141_7185_9 | 9107 | 9451 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_7185 | k141_7185_10 | 9479 | 10531 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_7185 | k141_7185_11 | 10637 | 11497 | - | GT2 |
| TC | k141_7185 | k141_7185_12 | 11530 | 12969 | - | 2.A.66.2.16 |
| CAZyme | k141_7185 | k141_7185_13 | 13210 | 15975 | - | GH25 |
| CAZyme | k141_7185 | k141_7185_14 | 16221 | 16994 | - | GT32 |
| CAZyme | k141_7185 | k141_7185_15 | 17058 | 17942 | - | GT2 |
| CAZyme | k141_7185 | k141_7185_16 | 17977 | 18675 | - | GT2 |
| CAZyme | k141_7185 | k141_7185_17 | 18672 | 19487 | - | GT2 |
| NULL(UNKNOWN) | k141_7185 | k141_7185_18 | 19536 | 20909 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_7185 | k141_7185_19 | 21233 | 22585 | - | 2.A.8.1.1 |
Gene ID: k141_7185_8
Type: TC
Location: 8314 - 9033 (-)
Type: TC
Location: 8314 - 9033 (-)
Gene ID: k141_7185_9
Type:
Location: 9107 - 9451 (-)
Type:
Location: 9107 - 9451 (-)
Gene ID: k141_7185_10
Type:
Location: 9479 - 10531 (-)
Type:
Location: 9479 - 10531 (-)
Gene ID: k141_7185_11
Type: CAZyme
Location: 10637 - 11497 (-)
Type: CAZyme
Location: 10637 - 11497 (-)
Gene ID: k141_7185_12
Type: TC
Location: 11530 - 12969 (-)
Type: TC
Location: 11530 - 12969 (-)
Gene ID: k141_7185_13
Type: CAZyme
Location: 13210 - 15975 (-)
Type: CAZyme
Location: 13210 - 15975 (-)
Gene ID: k141_7185_14
Type: CAZyme
Location: 16221 - 16994 (-)
Type: CAZyme
Location: 16221 - 16994 (-)
Gene ID: k141_7185_15
Type: CAZyme
Location: 17058 - 17942 (-)
Type: CAZyme
Location: 17058 - 17942 (-)
Gene ID: k141_7185_16
Type: CAZyme
Location: 17977 - 18675 (-)
Type: CAZyme
Location: 17977 - 18675 (-)
Gene ID: k141_7185_17
Type: CAZyme
Location: 18672 - 19487 (-)
Type: CAZyme
Location: 18672 - 19487 (-)
Gene ID: k141_7185_18
Type:
Location: 19536 - 20909 (-)
Type:
Location: 19536 - 20909 (-)
Gene ID: k141_7185_19
Type: TC
Location: 21233 - 22585 (-)
Type: TC
Location: 21233 - 22585 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus paracasei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.