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Cluster: CGMR087432_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_58846 k141_58846_20 23024 24202 + GH88
TC k141_58846 k141_58846_21 24302 24802 + 4.A.6.1.14
TC k141_58846 k141_58846_22 24955 25767 + 4.A.6.1.14
TC k141_58846 k141_58846_23 25757 26572 + 4.A.6.1.14
pfam k141_58846 k141_58846_24 26692 27162 + EIIA-man
pfam k141_58846 k141_58846_25 27162 27509 + YajC
CAZyme k141_58846 k141_58846_26 27448 29373 + PL12_1
NULL(UNKNOWN) k141_58846 k141_58846_27 29443 30426 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_58846 k141_58846_28 30454 31932 + GH136
Gene ID: k141_58846_20
Type: CAZyme
Location: 23024 - 24202 (+)
Gene ID: k141_58846_21
Type: TC
Location: 24302 - 24802 (+)
Gene ID: k141_58846_22
Type: TC
Location: 24955 - 25767 (+)
Gene ID: k141_58846_23
Type: TC
Location: 25757 - 26572 (+)
Gene ID: k141_58846_24
Type: pfam
Location: 26692 - 27162 (+)
Gene ID: k141_58846_25
Type: pfam
Location: 27162 - 27509 (+)
Gene ID: k141_58846_26
Type: CAZyme
Location: 27448 - 29373 (+)
Gene ID: k141_58846_27
Type:
Location: 29443 - 30426 (+)
Gene ID: k141_58846_28
Type: CAZyme
Location: 30454 - 31932 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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