Cluster: CGMR087432_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: CGMR087432
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56912 | k141_56912_57 | 56356 | 56940 | + | 3.A.7.19.1 |
| TF | k141_56912 | k141_56912_58 | 57066 | 58976 | - | HTH_11 | Mga |
| TC | k141_56912 | k141_56912_59 | 59151 | 59462 | + | 4.A.3.2.3 |
| TC | k141_56912 | k141_56912_60 | 59486 | 60724 | + | 4.A.3.2.6 |
| TC | k141_56912 | k141_56912_61 | 60761 | 61126 | + | 4.A.3.2.3 |
| CAZyme | k141_56912 | k141_56912_62 | 61145 | 62575 | + | GH1 |
Gene ID: k141_56912_57
Type: TC
Location: 56356 - 56940 (+)
Type: TC
Location: 56356 - 56940 (+)
Gene ID: k141_56912_58
Type: TF
Location: 57066 - 58976 (-)
Type: TF
Location: 57066 - 58976 (-)
Gene ID: k141_56912_59
Type: TC
Location: 59151 - 59462 (+)
Type: TC
Location: 59151 - 59462 (+)
Gene ID: k141_56912_60
Type: TC
Location: 59486 - 60724 (+)
Type: TC
Location: 59486 - 60724 (+)
Gene ID: k141_56912_61
Type: TC
Location: 60761 - 61126 (+)
Type: TC
Location: 60761 - 61126 (+)
Gene ID: k141_56912_62
Type: CAZyme
Location: 61145 - 62575 (+)
Type: CAZyme
Location: 61145 - 62575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lacticaseibacillus
Species
Lacticaseibacillus paracasei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.