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Cluster: CGMR087432_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16877 k141_16877_69 66746 68896 + GT83
CAZyme k141_16877 k141_16877_70 68932 69909 + GT2
TC k141_16877 k141_16877_71 70148 72811 + 3.A.3.2.21
pfam k141_16877 k141_16877_72 72921 73880 + ADH_zinc_N | ADH_N
TC k141_16877 k141_16877_73 74108 74911 - 3.A.1.34.1
TC k141_16877 k141_16877_74 74914 75885 - 3.A.1.34.1
TC k141_16877 k141_16877_75 76088 77056 - 3.A.1.34.1
pfam k141_16877 k141_16877_76 77615 78571 - ABC_sub_bind
CAZyme k141_16877 k141_16877_77 79054 81441 - GH3
Gene ID: k141_16877_69
Type: CAZyme
Location: 66746 - 68896 (+)
Gene ID: k141_16877_70
Type: CAZyme
Location: 68932 - 69909 (+)
Gene ID: k141_16877_71
Type: TC
Location: 70148 - 72811 (+)
Gene ID: k141_16877_72
Type: pfam
Location: 72921 - 73880 (+)
Gene ID: k141_16877_73
Type: TC
Location: 74108 - 74911 (-)
Gene ID: k141_16877_74
Type: TC
Location: 74914 - 75885 (-)
Gene ID: k141_16877_75
Type: TC
Location: 76088 - 77056 (-)
Gene ID: k141_16877_76
Type: pfam
Location: 77615 - 78571 (-)
Gene ID: k141_16877_77
Type: CAZyme
Location: 79054 - 81441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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