dbCAN Logo

Genome Details

Selected Rep_genome_ID: CGMR073586
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→
Species
Parabacteroides johnsonii
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR073586 4,030,374 98.45% 0% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR073586_CGC2 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR073586_CGC25 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR073586_CGC29 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR073586_CGC4 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR073586_CGC47 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
CGMR073586_CGC56 CGCFAM_00007 Yes 5 2
CGMR073586_CGC13 CGCFAM_00077 Yes 6 1
CGMR073586_CGC42 CGCFAM_00158 Yes 11 5
CGMR073586_CGC58 CGCFAM_00267 Yes 4 2
CGMR073586_CGC10 CGCFAM_00365 Yes 10 3 host glycan
CGMR073586_CGC40 CGCFAM_00431 Yes 5 1
CGMR073586_CGC38 CGCFAM_00436 Yes 6 1
CGMR073586_CGC62 CGCFAM_00519 Yes 4 1
CGMR073586_CGC5 CGCFAM_00732 Yes 4 2
CGMR073586_CGC3 CGCFAM_00792 Yes 6 2
CGMR073586_CGC18 CGCFAM_01021 Yes 14 6
CGMR073586_CGC54 CGCFAM_01022 Yes 8 3
CGMR073586_CGC57 CGCFAM_01259 Yes 5 2
CGMR073586_CGC8 CGCFAM_01403 Yes 13 1
CGMR073586_CGC44 CGCFAM_01404 Yes 9 3
CGMR073586_CGC43 CGCFAM_01605 Yes 6 1
CGMR073586_CGC16 CGCFAM_01970 Yes 7 1
CGMR073586_CGC20 CGCFAM_02014 Yes 8 4
CGMR073586_CGC64 CGCFAM_02567 Yes 8 3
CGMR073586_CGC63 CGCFAM_02611 Yes 3 1
Top CAZyme Families