Cluster: CGMR073586_CGC42
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR073586
- CGC Family ID: CGCFAM_00158
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_90610 | k141_90610_18 | 24663 | 26420 | - | GH141 |
| TC | k141_90610 | k141_90610_19 | 26470 | 27699 | - | 2.A.1.33.2 |
| CAZyme | k141_90610 | k141_90610_20 | 27706 | 28755 | - | GH130_4 |
| CAZyme | k141_90610 | k141_90610_21 | 28862 | 31171 | - | GH92 |
| NULL(UNKNOWN) | k141_90610 | k141_90610_22 | 31309 | 32778 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_90610 | k141_90610_23 | 32775 | 34442 | - | SusD_RagB | SusD-like_3 |
| TC | k141_90610 | k141_90610_24 | 34455 | 37904 | - | 1.B.14.6.1 |
| STP | k141_90610 | k141_90610_25 | 38139 | 39128 | - | FecR |
| STP | k141_90610 | k141_90610_26 | 39183 | 39773 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_90610 | k141_90610_27 | 39839 | 43585 | - | GH2 | GH2 |
| CAZyme | k141_90610 | k141_90610_28 | 43684 | 45636 | - | GH51_2 |
Gene ID: k141_90610_18
Type: CAZyme
Location: 24663 - 26420 (-)
Type: CAZyme
Location: 24663 - 26420 (-)
Gene ID: k141_90610_19
Type: TC
Location: 26470 - 27699 (-)
Type: TC
Location: 26470 - 27699 (-)
Gene ID: k141_90610_20
Type: CAZyme
Location: 27706 - 28755 (-)
Type: CAZyme
Location: 27706 - 28755 (-)
Gene ID: k141_90610_21
Type: CAZyme
Location: 28862 - 31171 (-)
Type: CAZyme
Location: 28862 - 31171 (-)
Gene ID: k141_90610_22
Type:
Location: 31309 - 32778 (-)
Type:
Location: 31309 - 32778 (-)
Gene ID: k141_90610_23
Type: pfam
Location: 32775 - 34442 (-)
Type: pfam
Location: 32775 - 34442 (-)
Gene ID: k141_90610_24
Type: TC
Location: 34455 - 37904 (-)
Type: TC
Location: 34455 - 37904 (-)
Gene ID: k141_90610_25
Type: STP
Location: 38139 - 39128 (-)
Type: STP
Location: 38139 - 39128 (-)
Gene ID: k141_90610_26
Type: STP
Location: 39183 - 39773 (-)
Type: STP
Location: 39183 - 39773 (-)
Gene ID: k141_90610_27
Type: CAZyme
Location: 39839 - 43585 (-)
Type: CAZyme
Location: 39839 - 43585 (-)
Gene ID: k141_90610_28
Type: CAZyme
Location: 43684 - 45636 (-)
Type: CAZyme
Location: 43684 - 45636 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.