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Cluster: CGMR073586_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42587 k141_42587_35 39830 43168 - 9.A.25.1.1
CAZyme k141_42587 k141_42587_36 43165 44331 - GH105
TC k141_42587 k141_42587_37 44527 46125 - 8.A.46.1.6
TC k141_42587 k141_42587_38 46146 49226 - 1.B.14.6.1
TF k141_42587 k141_42587_39 49408 53439 - HTH_AraC
CAZyme k141_42587 k141_42587_40 53587 55704 + GH2
NULL(UNKNOWN) k141_42587 k141_42587_41 55980 56165 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_42587 k141_42587_42 56229 58544 + 2.A.37.4.2
CAZyme k141_42587 k141_42587_43 58612 60621 + GH13_8
Gene ID: k141_42587_35
Type: TC
Location: 39830 - 43168 (-)
Gene ID: k141_42587_36
Type: CAZyme
Location: 43165 - 44331 (-)
Gene ID: k141_42587_37
Type: TC
Location: 44527 - 46125 (-)
Gene ID: k141_42587_38
Type: TC
Location: 46146 - 49226 (-)
Gene ID: k141_42587_39
Type: TF
Location: 49408 - 53439 (-)
Gene ID: k141_42587_40
Type: CAZyme
Location: 53587 - 55704 (+)
Gene ID: k141_42587_41
Type:
Location: 55980 - 56165 (-)
Gene ID: k141_42587_42
Type: TC
Location: 56229 - 58544 (+)
Gene ID: k141_42587_43
Type: CAZyme
Location: 58612 - 60621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_42587_37 vegetarian > vegan 1.02791 0.01155

🧭 Explore Read Mapping of CGC

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