Cluster: CGMR073586_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR073586
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10264 | k141_10264_16 | 23290 | 26580 | + | 1.B.14.6.1 |
| pfam | k141_10264 | k141_10264_17 | 26594 | 28144 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_10264 | k141_10264_18 | 28205 | 30322 | + | GH20 |
| CAZyme | k141_10264 | k141_10264_19 | 30484 | 33147 | + | GH2 |
| CAZyme | k141_10264 | k141_10264_20 | 33188 | 33976 | + | GH16_3 |
Gene ID: k141_10264_16
Type: TC
Location: 23290 - 26580 (+)
Type: TC
Location: 23290 - 26580 (+)
Gene ID: k141_10264_17
Type: pfam
Location: 26594 - 28144 (+)
Type: pfam
Location: 26594 - 28144 (+)
Gene ID: k141_10264_18
Type: CAZyme
Location: 28205 - 30322 (+)
Type: CAZyme
Location: 28205 - 30322 (+)
Gene ID: k141_10264_19
Type: CAZyme
Location: 30484 - 33147 (+)
Type: CAZyme
Location: 30484 - 33147 (+)
Gene ID: k141_10264_20
Type: CAZyme
Location: 33188 - 33976 (+)
Type: CAZyme
Location: 33188 - 33976 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.