Cluster: CGMR073586_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR073586
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_90754 | k141_90754_21 | 23583 | 26582 | + | 1.B.14.6.1 |
| pfam | k141_90754 | k141_90754_22 | 26595 | 28220 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_90754 | k141_90754_23 | 28394 | 29464 | + | CBM32 |
| CAZyme | k141_90754 | k141_90754_24 | 29481 | 31808 | + | GH92 |
| CAZyme | k141_90754 | k141_90754_25 | 31826 | 34114 | + | GH92 |
Gene ID: k141_90754_21
Type: TC
Location: 23583 - 26582 (+)
Type: TC
Location: 23583 - 26582 (+)
Gene ID: k141_90754_22
Type: pfam
Location: 26595 - 28220 (+)
Type: pfam
Location: 26595 - 28220 (+)
Gene ID: k141_90754_23
Type: CAZyme
Location: 28394 - 29464 (+)
Type: CAZyme
Location: 28394 - 29464 (+)
Gene ID: k141_90754_24
Type: CAZyme
Location: 29481 - 31808 (+)
Type: CAZyme
Location: 29481 - 31808 (+)
Gene ID: k141_90754_25
Type: CAZyme
Location: 31826 - 34114 (+)
Type: CAZyme
Location: 31826 - 34114 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides johnsonii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.